Salvelinus fontinalis (brook trout): 129812894
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Entry
129812894 CDS
T11136
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129812894 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129812894 (mlh3)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129812894 (mlh3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129812894
NCBI-ProteinID:
XP_055720830
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Position
16:complement(26995059..27013340)
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AA seq
1243 aa
AA seq
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MIKCLSKEVQGKLRSGIAIFSLQQCLEELILNSIDASATCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDHLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLSKARNTYYRFVQIHGLGRAQKLGEINHSHAQFEVSGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSLSRQNDSPGTPPAIRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIEEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGVQTHMEGVTLECNVGRTLASEPVHRRQTEDSD
KMKSVCQTCDGVESEQGDRVGKPRDKEVLTGFEQEQEHNTTNPQCRPSSVDTDQGLQYDS
ITDSSVTDSSESYKEVTKENESNAHLKSAISCPESSQHSLIFKTKGENLKISIEEGTEMK
DNKREHVSLSRCTVRAPCSLTQGIQSEMGSIKQTLPQPQDTELNPGGHRKIFLSHPYIHS
SLPSQKCLSHQSRQGIALESRDKLATKRKWPMVEGPGHLHVYDREGKDLPTGIPSKISTF
MSCQKLPLYKEAGSLDRFRRIYGKLTESNPVPVDVNSNYLAIDATASQTKHLVMNAKAVL
PYLEANQERDVTESRLDLMKDHKSPLTLSMFTKLKSLSARSSEISLAAKLSQLKHQRTEV
ATSAFVHPPETTSNEDICPQDTVENNAILEINNGEQHNNTGQNRDFIPGCSTNPLPDEKE
ANNVTASCDWLHHYDDAVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKK
GIEYRCYPFQMDLVLPFLPKSKAGRVLSSGPDNRDDIQDSNSLSSLYSEWTNPVFARPPM
VGVDISSVQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPAACS
ETDGNLLVLVDQHAAHERVRLENLVADSYEDDPEAPGERRLCSSTVAPPLEVSVTEEELR
LLRSCQPSLRGLGLEMQFLQIGDPQVLVGKVPMCFTEKERNELRRGRRSIIKPIVEEYLQ
EQIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDSLSKKECCSLVGALSSCQLPFQC
AHGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYKAWELYGNR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgtcaaaagaagttcaaggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtcttgaagagcttattctgaacagtattgatgctagtgcaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtaggaaacagatacttcacaagcaaatgcagttct
ttagaggacctagatcatctcaaattctatggattcagaggagaagctgttgccagtatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtgaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacaactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttcactc
attcacccctctgtctctttcacgctgaagaatgactgcacagggaccatggtggtgcag
ctctccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaaccactcccatgcacagtttgaagtaagtggttatgtagga
cgagaaggccactacaacaacaccttacagttcctctatgtgaatgacaggctacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagtttaagtcgg
cagaatgacagccctggtacaccacctgccattaggagcccaaagcagagaagaggagcc
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gaagaggcggtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagatgga
gttaaggactccattggcaaaggtgtccaaacacacatggagggtgttaccctggaatgt
aatgttggaaggacccttgcatctgaacctgttcatcgacggcagacagaagactctgac
aagatgaaaagtgtttgtcagacatgtgatggagttgaatcagagcagggtgacagagta
ggaaaaccaagggacaaggaggtccttacgggttttgaacaggaacaagagcataatacc
acaaacccacaatgtcgaccaagctcagtagatacagaccaaggtctacagtatgattca
attacagattcatcagttacggattcatcagagtcttacaaggaagttacgaaagagaat
gaaagcaatgcacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtctt
atctttaagacaaagggagaaaatctgaaaattagtatagaagaaggaacagagatgaag
gataataaaagagagcatgtatccctctcaagatgcactgtgagagcaccatgttctctc
actcagggaatccagtcagagatgggctctatcaaacagacactacctcaaccacaggac
acagaactgaatccaggtggacacagaaagatctttctatcacatccatacattcatagc
agtttaccctctcagaaatgtctctcccaccagagtagacaagggatagcgttagaatct
cgagataaacttgcaacaaaacgaaaatggcctatggtggagggcccaggccatcttcac
gtttacgacagagaaggtaaggaccttcccactggcatcccttcaaagatttctacgttc
atgtcatgtcaaaagcttcctttatataaagaggctggatctctggacaggttcagaaga
atatacgggaagcttaccgaatccaatccagttcctgtcgacgttaatagcaattattta
gcaattgatgccacagcttcccagaccaaacacttggttatgaatgccaaggctgttttg
ccctatcttgaagcaaatcaagaaagggatgtcacagagtcacgtctggatctgatgaaa
gaccacaaaagcccattaacactctccatgttcaccaaactcaaatctctctctgctcgg
agcagtgaaatatctttggctgccaaactctctcaattaaaacaccaaaggacagaggtt
gcaaccagtgcatttgtacatcctccagagactacttcaaatgaggatatatgtccccag
gacactgtagaaaacaatgctattctagaaatcaataatggagaacaacacaataacact
ggccagaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaa
gcgaacaatgtcacagcatcatgtgattggctgcatcactatgacgatgctgtggggaag
ctggtctacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagag
acgcaagtgtcttgcacgtcagatgtcaccaacatggcaatcagtgtcatctccaaaaaa
gggattgagtacaggtgttacccatttcaaatggatctagtcttgcccttccttcccaaa
tccaaagcagggagagttcttagttcagggcctgacaatcgagatgacattcaggactct
aattcactgtcctccctgtactctgagtggactaaccctgtgtttgcacgacctcctatg
gttggtgtggacatatcaagtgtgcaagctgaaggactggctgtgaagatccataacatc
ctctttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtg
gataagaagtttcttgcatgtcttatcaacacacaagaccaagagcctgcggcctgcagt
gaaactgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgt
cttgagaatctagttgcagattcgtacgaggatgatccagaggcaccgggggagagacgg
ctatgctcatccactgtagccccaccactggaggtcagcgtgacagaggaggagctgagg
ctgctcaggtcctgccagccatccttgaggggcctgggtctggagatgcagttcttgcag
ataggagatccccaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagaga
aatgaactccgccgggggaggcgttctatcatcaagcccatagtggaggagtaccttcaa
gagcagattgagttactgcgttcaactggcagagtgcgagggacattgcctcttacggta
cttaaagtcctcgcctcccttgcatgtcatggtgcaatcaaattcaatgacagcctcagt
aagaaggagtgttgcagcctggtaggcgctctatcttcgtgccagttgcccttccagtgt
gcccatggccgcccatccatcgccccgctggtagacgtccttcacttgaatgaccaagag
gaaccacctagaccaaaccttagaaaactgagaagaatgtacaaagcctgggaactttat
ggaaatagataa
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