Salvelinus fontinalis (brook trout): 129813017
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Entry
129813017 CDS
T11136
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
sfon04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129813017
04082 Neuroactive ligand signaling
129813017
04519 Cadherin signaling
129813017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129813017
Ion channels [BR:
sfon04040
]
Ligand-gated channels
GABA-A
129813017
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
129813017
NCBI-ProteinID:
XP_055721102
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Position
16:complement(31420722..31441495)
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AA seq
507 aa
AA seq
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MPSAFGRNFTSGLSEEIHKEIPRASQVWISAMRERWDLSYYLAVFFSLMVLWQSRSIVQS
SAYASEAFKNNITLFTRILDRLLDGYDNRLRPGLGDRVTEVKTDIYVTSFGPVSDTDMEY
TVDVFFRQSWIDERLKFNGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLR
IMEDGTLLYTMRLTVQAECPMHLEDFPMDSHSCPLKFGSYAYTMAEVTYIWTRNASASVE
VALDGSRLNQYHLQGQTVGTETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVIL
SQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSA
LIEFATVNYFTKRGWAWDGKSVVNVKQKKEASTMKKNNAYAVAVANYAPNVTKDQSGLPT
ISKSATSDPNKAKPEVKPEQNKKTFNSVSKIDLSCLWTRYTQVSVDPAGPHSTLLDSPGV
QGWMKTHCSYRSFCNDSQALRHCDKGQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgcctttgggcgcaactttacatctgggttgtcagaagaaattcataaggag
atccctcgcgctagtcaggtttggatttcagcaatgagagagcggtgggatttatcgtat
tatctagcggtgttcttctcgttgatggtactgtggcagtcaagatcaatagtgcaatcg
tctgcatatgcttcagaggccttcaaaaacaacatcactctgtttacccggatcttggac
cgccttctggatggctatgacaaccgattacgacctggacttggagatcgggtgacggag
gtgaagactgatatttatgtcacaagtttcggtccagtgtcagacacagacatggagtac
actgtggacgtgttcttccgtcagagctggattgacgagcggctgaagttcaacggtccc
atgaacatcctgcggctgaacaacctgatggccagtaagatctggacgcccgacaccttt
ttccacaacgggaagaaatctgtagctcacaacatgaccatgcccaacaaactgctccgg
atcatggaggatggaacactgctgtacactatgaggttaacggtccaggcagaatgtccc
atgcacctcgaagatttccccatggattcccactcctgtccactgaagtttggcagctat
gcctacacaatggccgaggtgacgtacatttggacccgaaacgcatcggcgtcagtggag
gtagcactagatggatccagactgaaccagtatcaccttcagggacaaactgtggggaca
gagaccattaaatcaagcactggtgaatacactgtcatgacggcccacttccacctgaag
aggaagattggctactttgtgatccagacctacctgccctgcatcatgaccgtcatcctc
tcccaggtctccttctggctcaaccgagagtctgtacccgccagaactgtctttggtgtg
accactgtgctcactatgacgactctcagtatcagtgcccgtaactctctgccgaaggtg
gcctacgccacagccatggattggttcattgcagtgtgctacgccttcgtgttctctgcc
ctcatcgagtttgctaccgtcaactacttcaccaaaagaggctgggcctgggatggcaaa
agtgtggtcaatgtcaagcagaagaaggaggcgtctaccatgaagaagaacaacgcctat
gccgttgctgtggcaaactatgccccgaacgtcaccaaggaccaaagtggtctgcccacc
atctccaagagcgccacctctgaccccaacaaggccaagccagaggtcaagccagagcag
aacaagaagaccttcaacagcgtcagcaaaattgacctgtcgtgtctttggaccaggtac
acacaagtgagtgttgatcctgcaggtccccacagtacactgctagactcaccaggagtt
cagggatggatgaagactcactgttcttatcgtagcttttgtaatgactcacaggctcta
agacactgtgacaaagggcagtga
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