Salvelinus fontinalis (brook trout): 129813019
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Entry
129813019 CDS
T11136
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129813019
04082 Neuroactive ligand signaling
129813019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129813019
Ion channels [BR:
sfon04040
]
Ligand-gated channels
GABA-A
129813019
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
129813019
NCBI-ProteinID:
XP_055721112
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All DBs
Position
16:31487025..31563007
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AA seq
486 aa
AA seq
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MCTALDRGRWGIFCLFLMVAMVCGAQSANEPSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAQTNNENKSRLESNK
VQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMA
SRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVY
WLYYVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactgctttggaccgcggacgctgggggattttttgtcttttcctcatggtcgcc
atggtctgcggcgctcaaagcgccaacgagcctagcaatatgtcatttgtgaaagcgacc
gtcgacaaactgctgaaggggtatgacattcgtttgaggcctgattttggaggtgcccct
gtggacgttggcatgagcatagatatcgccagtatcgacatggtttcggaagtcaacatg
gattacaccatcactatgtacttccagcagtcctggagggacaaacgcttatcctacaca
gggattcccctcaacctgacactggacaacagggtggcagactcgctctgggtccctgac
acctacttcatcaacgataagaagtcctttgtgcacggggttacagtgaagaacagaatg
atccgactccatcctgacggaactgtgctctacggcctcaggatcaccactactgcagct
tgcatgatggacttgcgtagatacccactggatgagcagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaactgccccaattctctattatagactaccacatccaatccaca
aaagcagtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctcgaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggcataacc
actgtgctgaccatgaccaccatcaacacccacttgagagagactttacccaaaatcccc
tacgtcaaggctatagacatctacctgatgggctgcttcgtgtttgtcttcctcgccctg
ctggagtacgcctttgtcaactacatcttcttcggacgggggcctcacttgcagaaaaag
gtggcagagaaagcagctcaaaccaataacgaaaataagagccgattggagagtaacaaa
gtgcaggtggacgcacacggcaatatcctcctgaccaatctggagatccgtaacgagatg
ggcgggatgggtggcatggccgggatgaccggggctgaaatgataggggctctcaacgac
ccgcgggccaccatgttctcctacgacagcgccagcatacagtaccgtaagcccatggcc
agccgagacctgtacggtcgaccagccctcgaccggccagtcggccacaagaagagtcgt
ttgaggaggagggcatcgcagctcaaagtcaagatccctgacctgacagacgtcaacgcc
atagacaagtggtcccgtgtcatcttccctatcgccttcaccttcttcaacctggtctac
tggctgtactacgtccactag
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