Salvelinus fontinalis (brook trout): 129813034
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Entry
129813034 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04060
Cytokine-cytokine receptor interaction
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129813034
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129813034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sfon04052
]
129813034
Cytokines and neuropeptides [BR:
sfon04052
]
Cytokines
Transforming growth factors (RSTK binding)
129813034
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Vir1p
Motif
Other DBs
NCBI-GeneID:
129813034
NCBI-ProteinID:
XP_055721144
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Position
16:31923249..31932260
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AA seq
473 aa
AA seq
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MILTQSKEQGEFPKXSNPSNFLIYSYRPLKMDPIRAAAPLLWFSLCFGNIMETAVLGSLQ
YPSSADDNGHVSHLDEQSRRKPTAVSRKDPPINDTIVPHDYMVSLYRTLSEIERRGLNSS
VPRSARHANTVTSFVDQGKDPSSWGSGQRYLFDLSSLSRTDEIVEAELRILRKPPLDRLP
MLTWGRNLYRLLLYTCSSKGNSGRRLLDSRTVDVLDREPPKWDVFDVWASVKARWRSHRT
AAGNDLLVACFDLLVVSELTKEASNPLTVGLGRRSRQPQERALLVAFSRTRRKENLFKEI
REQMKAVRRDLGFLDPSDLSGDVIGHLPRRRQRRTALTGRSIGGAGGGGGGGGVGGGGGR
GVGGGGRRKTRCSRRPLHVNFKELGWDDWIIAPLDYEAHHCEGVCDFPLRSHLEPTNHAI
IQTLMNSMDPESSPPSCCVPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatattaacacaatctaaagagcaaggggagtttccaaagtaatcaaacccgtccaac
tttctcatttacagctatagaccactgaaaatggatcctattagggctgctgctcctttg
ctatggttttccctgtgctttgggaatattatggagacagcggtacttggatcattgcag
tacccctctagcgcagatgataacgggcatgtttcacatctggatgagcagagtcggaga
aagccgaccgcggtgtccaggaaagaccctccgataaatgatactatcgtcccccatgac
tatatggtatcactatacaggacactctctgaaatagagagaagaggtcttaacagcagt
gttcctcgctccgcaagacacgccaacacggtgaccagtttcgtggatcaaggaaaagat
ccctcctcctggggaagtggccagcgctatctcttcgacctctccagcctgtccaggaca
gatgagatcgtggaggcagaactgaggatcctgagaaagccaccgctggatcgcctccct
atgctgacatggggcaggaacctttatcgcctcctcctctacacatgttcctctaagggg
aactctgggagacggctgctggactccaggacagtcgacgttctggaccgcgagcctccg
aaatgggatgtctttgacgtgtgggccagcgtgaaagctcggtggaggagccacaggaca
gcagcgggcaatgacctcctcgtggcctgctttgacctgctggttgtttcagagttgacc
aaagaggcatccaaccctcttacagtagggctgggacgccggtctcggcagccccaggag
agggccttgctggtggctttttctcgcacccgcaggaaagagaacctgttcaaggagatc
agggagcagatgaaggcagtgcgaagagacttgggttttctggacccttcggacctctct
ggtgacgtgattggtcacctacccaggcgacgccaacgccggactgccctcaccggccga
tctataggcggagctggtgggggaggagggggaggtggtgttggaggaggaggaggaagg
ggcgttggaggcggggggcgcaggaagactcgctgcagccgtaggccgctccatgtcaac
ttcaaggagttgggctgggacgactggatcatcgcaccgctggattatgaggcgcaccac
tgtgagggcgtgtgcgactttccgctgcgctcacacctggagcctacgaatcatgccatc
attcagacacttatgaattctatggaccctgaatccagcccgcccagctgctgtgtcccc
tccaaactcagccccatcagcatcctctacattgactctggcaacaatgtggtctacaag
cagtatgaggacatggtggtggagagctgtggctgcaggtag
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