Salvelinus fontinalis (brook trout): 129813163
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Entry
129813163 CDS
T11136
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129813163
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129813163
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129813163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_EML
WD40_like
KNTC1_N
Synaptobrevin
PEP5_VPS11_N
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
129813163
NCBI-ProteinID:
XP_055721389
LinkDB
All DBs
Position
16:complement(40358744..40410587)
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AA seq
1147 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSSGTASPQPGTNQNDVIQETLQSEHFQLCKTVRHGFPYQPSSM
AFDPVQKILAIGTQSGAVRLFGRAGVECYCQHDSGAAVIQLQFLVNEGALVSALADDSVH
LWNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNHDEAIHSV
AWHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTT
RVGDAFVVMSGGLSYDTGCRRSCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVVLLEKDLVVIDLEQIGYPIFENPYPLSIHESPVTCVEYFADCPPELIPALYSVGSRQ
KRQGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFE
KALKGGKEEKPSTEIVDEDPFAIQTLSWCAESRMLCVAGVSAHVIIYRFSKQEMTTEVVQ
LLEVRMQGELNDVDSPDPAGDHPPTPSTPVPPSSFSPTQEGEPSEAQPFTSDDRPRDNVP
CLKVRSAPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVSSSDGLVVFGNSSGLAVVDYL
QKSLLLNMSTSELYSPSDPYQRQPRSPRKTRQPSGALSDNSDGNNVSEEKSNKSPTSGSM
TPTNSDDEHKQKRFIEMVKSKSRRFSKTVANDFAKMSKKISSPTEQKTGLDAKDSLFSRS
RSSSVTSIERESREAISSFHFSESFPRKTDSSPSPSLWLGTTQGTVLVLSLSLPPTGDQR
LQQPVGVSSCGTLVRLKGGILTMAFLDSLGAVLHPSYEPWSEPNAPDEEKTRRRRPASPP
PTQEGQDSQYAVVCSEKQAKVVGLPSQSCFFKHNITESSFVLRADVVQMAAGLCLACFCA
NGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCD
NLQEMMGELFTPLETPEAPNRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGP
QGMEGMKGAASGVVGDLARARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYK
DKKWYQL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatcagaaaagtgctggacggcttgactgcttcttcttcatctggc
actgcatctccacaaccaggaactaatcaaaacgatgtgatccaagagacgctacaatcg
gagcatttccagctctgcaagactgtgcgccatgggttcccctaccagccctcctccatg
gcctttgaccctgtgcaaaaaattctggccatcgggactcagagcggagctgtgagactt
tttggccgtgctggtgtggagtgttactgtcagcatgacagtggtgcagctgtaatccag
cttcagtttctggtcaacgagggggcgctggtgagtgccttagctgatgacagcgttcac
ctgtggaacctgaggcagaagcagccagctatcctgcacactctcaaattcaatcgggag
aggatcacgttttgtcacctgcccttccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtccttcacactgtcaggctacgtcattatgtgg
aacaaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgat
aaccccatggatgagggaaagattttgattggatttgaatgtgggaccgtggtgttgtgg
gatctgaaatgcaaaaaagctgactaccgctacaatcatgatgaggccatccactcagta
gcctggcaccatgagggaaaacagttcacctgcagccactcagatggaactctgaccaca
tggaacgtacgtgtccccgccaagcctacaatcaccatcacaccacacggtaagcagccc
aaggatggaaagaagccagaaccatgcaaacctatcctcaaagtggagtataaaaccact
agagttggggacgccttcgtggtcatgtctggaggcctgtcctatgacacggggtgcagg
aggtcctgtctgacggtgatgcatgggaagagtactgccgttctggagatggactatccc
atcgtagacttcctcacgctctgtgaaacaccatatcctaatgatttccaggagccttat
gctgtagttgtcctcttggaaaaggatttagttgtcatcgaccttgaacaaattgggtac
ccaatatttgagaacccgtaccctctgtcgatccacgagtctccagtgacgtgcgtggag
tactttgctgactgccctcctgaactcatacctgcactttactctgtgggctcccggcaa
aagagacagggttacagtaagaaggaatggcctataagtggtggtaactggggccaaggc
acactgagctaccctgagatcatcgtcactggacatgctgatggctcaatcaagttttgg
gatgcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgag
aaggctctgaagggcggtaaggaggagaagccgagcacagagatagtggatgaggatccc
tttgccatccagactttgtcgtggtgcgcagagagcagaatgctgtgtgtggccggagtc
tccgcccacgtcatcatctataggttcagcaaacaggaaatgaccacagaggtggtgcag
ctattggaggtgcgtatgcagggtgagctgaacgatgtggattctccagacccagcagga
gaccatcctcccaccccttctaccccagtacccccctcctccttcagccccacccaggag
ggagagccctctgaggcccagcccttcacctctgatgaccggcccagagataacgtacca
tgccttaaggtccggagcgcccctttgaagcagtctcctggttaccaggtggagctggtc
attcaactggtctgggttagtggggagccgccgcagcagatcaccagcctggccgtcagc
tcgtcagacggacttgtggtgtttggcaacagcagcggtctggctgtcgtggactacctt
cagaagagcctcctcctgaacatgagcacgtcagaactgtacagtccctcagacccctac
cagagacagcctcggtcgcctcgcaagacacgacagccatctggagctctcagtgataac
agcgatggaaacaacgtttcagaggagaaaagcaacaaatcaccaacgtcaggctctatg
acacccaccaattcagacgatgaacacaaacagaaaaggtttatagaaatggtgaagtcc
aaaagcaggcgcttttccaagacggttgccaatgactttgccaagatgtcaaagaaaatt
agctcacctacagagcaaaagacaggcctggatgccaaagacagtttgttcagccgctcg
aggagctccagtgtgaccagtatagagcgggagtcccgcgaagccatctcctccttccac
ttcagtgagagtttccccaggaagacagacagcagccccagccccagcctgtggttgggg
actacccagggcactgtcctggtcctctccctcagcctgccacctacaggggaccagagg
ctgcagcaacctgtcggagtctcttcctgtggtactctggttagactaaaaggaggtatc
ctgactatggccttcctggactcccttggggcagtcctacacccttcctacgagccgtgg
tccgagcccaacgctccagacgaggagaagacgaggaggcgcaggccggcctccccaccc
cccacccaggagggtcaggacagccagtacgctgtggtgtgttcagagaaacaggccaag
gtggtgggcctgccctcccagtcctgcttcttcaaacacaacatcacagagagctccttt
gtgctgagagctgatgtggtgcagatggccgctggactctgcctcgcctgcttctgtgct
aatggacacatcatgactctgagtctacccagtctcagaccactcctggatgtaaactac
cttcccttgacagacatgaggatagcccggaccttctgcttctccaacctgggccaggct
ctgtacctcacctcccccactgagatacagaggatcacatacagccaggagacctgcgac
aatctacaggagatgatgggagagctgtttacaccgttagagacacctgaagctcctaat
agaggtttcttcaagggcctgtttgggggaggagctcagtcgctggatagagaagacctg
tttggtgagactgcggcgggtaaggcatctcgtagcctggcgcagcacattcctgggccc
cagggcatggagggtatgaagggagcagcctctggggtggtgggggacctggcccgtgcc
cggatagccctggacgagagggggcagaaactgggcgagctggaggacagaaccgcagcc
atgatggccagcgctgactccttctctaaacatgctcatgatatgatgctgaagtacaaa
gataagaagtggtaccagctctga
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