Salvelinus fontinalis (brook trout): 129813504
Help
Entry
129813504 CDS
T11136
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129813504 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129813504 (aire)
04121 Ubiquitin system [BR:
sfon04121
]
129813504 (aire)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
129813504 (aire)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129813504 (aire)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
SAND
PHD-1st_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
129813504
NCBI-ProteinID:
XP_055721775
LinkDB
All DBs
Position
17:complement(34408939..34423796)
Genome browser
AA seq
511 aa
AA seq
DB search
MSRVEAFEDPDPRSQLKEFRTDISMVIDDPFPLLYGLVDRSIISDQILKETLEREGREGI
HKAMYSLLSRLLEQSRTTIQAFWTNLAKDYNQHSYPRLQALLTSIQPGREMVGSKQGKRS
PRGSRESHSRKRSLGERHPHHPHHSQHHSKSGKVKSVKKSEVAGVQAVSTSVQRAVTLSS
SELPVSCGAREEILIKQVFGSGSAKKCIKVGGEYYTSGPLDELTGGLKTKSVNTKYHHKE
ESSTRVRDAQRNDDECAVCKDGGELICCDGCPRAYHLTCLDPPLTTIPSGTWRCQSCHSN
KVRRERIYPVLPVQPLAQSQLTETSSSNSTIDFSFFSSLSSTSHSSVTTTKSGQVCAYQC
AGGEVVEVRETCGVCLLSGGDLALCLQCLQKYHTYCHFPNGRSICSSCSRPWGSSTDREA
ESKGLQVLSVCVCVCVCVYLVIIQSYFLSQPLYTQVGLTPHTQEHSSLSEPILHKDELDS
IMGEQGSIDGILQWAFHNISRPLSDTQGYFQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtggaggcttttgaggatcccgacccccgttcccagctcaaggaattccgc
acggacatctccatggtgattgatgatcccttcccactgctctatgggttggtggaccgc
agcatcatcagcgaccaaattctgaaggagaccctggagagggaaggcagagaggggatc
cacaaggccatgtactccctgctttccaggctcctggagcagagtaggaccaccatccag
gccttctggaccaacctggccaaggactacaaccagcacagctaccccagactgcaggcc
ctcctgaccagcattcaaccaggtagggagatggtgggctccaagcaggggaagagatcc
ccgcgagggtctcgagagtcccacagcaggaagaggagcctgggggagagacaccctcat
caccctcaccactctcagcaccacagcaaaagtggcaaagtgaagtcagtgaagaaaagt
gaagtagcaggtgtccaggcggtgtccacctcggtccagagggcagtcactctgtcgtcc
agtgagctgccggtcagctgtggggccagagaggagatcctcatcaaacaggtgtttgga
tctggaagtgccaaaaagtgcattaaagtgggtggtgagtattacacctctgggccattg
gatgagctgactggaggcctcaagacaaagtctgtaaatactaaataccaccacaaggag
gagtccagcaccagggttagagacgcccagcgtaatgatgatgagtgtgcagtgtgtaaa
gatggaggtgagctcatctgttgtgatggctgtcccagggcctaccacctgacctgccta
gaccctcccctcaccacaataccaagtggtacttggcgctgtcagtcatgtcatagcaat
aaggtgagaagagagagaatctacccagtactacctgttcagcccttggctcagagccag
ttgacagagaccagctccagtaactccaccatagacttctccttcttctcttccttatcc
tccacctctcactccagcgtcaccacaaccaagagcggtcaggtctgtgcatatcagtgt
gcaggtggcgaggtggtggaggtcagggagacgtgtggggtttgcctcctcagtggagga
gacctggccctctgtctccagtgcctacagaagtaccacacctactgccacttcccaaat
gggaggtccatctgctcctcctgcagtaggccctggggcagctcaacagacagagaggcg
gaatccaagggcttacaggtactgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttg
gtcattatacagtcttattttctctctcaaccactgtacacccaggttggtctgactcca
cacactcaggagcactcgtctctctcagagcccatcctacacaaggatgaactagactcc
atcatgggagagcagggctccatcgacgggatcctgcagtgggctttccataacatctcc
aggcctctctcggacactcagggctacttccaatga
DBGET
integrated database retrieval system
