Salvelinus fontinalis (brook trout): 129813544
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Entry
129813544 CDS
T11136
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04261
Adrenergic signaling in cardiomyocytes
sfon04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129813544
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129813544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129813544
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129813544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
CcmD_alt
Snf7
Motif
Other DBs
NCBI-GeneID:
129813544
NCBI-ProteinID:
XP_055721815
LinkDB
All DBs
Position
17:1460111..1589578
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AA seq
2023 aa
AA seq
DB search
MAATLLPTGPDGLRRFTRESLAAIEQRIAEEQAKNAKDYQEDLGNVELPMPRPDLEAGKQ
LPRIFGDIPPGLVGVPLDDIDPFYFKNQRTFIVVNKGTAIFRFSATSALYIFTPFAFLRR
ISIKVLVHSLFSLFIMCTILTNCCFMAMSDPAPWTKYLEYTFTGIYTFESMIKIFARGFC
VGPFTFLRDPWNWLDFSVISMAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGILRQKCVRSAAHCVNSSYNVNDTFTCNN
RTWNSMNDFVTNEDNFYKVEGAKDALICGYGQDAGKCPEGFDCLRIGRNPNYGYTSFDSF
GWAFLALFRLMTQDYWENLYHQTLRSAGKTYMVFFVLVIFLGSFYLVNLILAVVAMAYEE
QNQATIQEAWMKEREFQLAMEHVRREQRMAERRIQQETDSVVSPELSPFQLKAGSSLKRT
ASRRSHRMLSEDPEDEADGKFEPLDERVSPLPPTSPMPVHPLLAAMSSHPLSTRRGSQAS
IFSFRPCATSDADFGDDEYSVHGDVMGRSRAGSTIGPNWQHKHKRTGSVRSHCSQVFTPS
LNINGRLNISLDQNGVTTVGLHTPTSLPACSMEKVKEDKEPTCIDESSAKPAQLSPEAAE
PPLRRKRGLSSISFLSDAMDGEGTFRELEESRQKCPPCWYTFAKAYLIWDRCPWWLKVKE
YVKMIVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNNVLSVGNLVFTVIFTAEMVFKL
IAMDPYYYFQQGWNMFDGIIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTL
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYQDCVCKISKDCMLPRWHMKDFFH
SFLIVFRVLCGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSSDN
LSAPDEDGEMNNIQIAVARIHTGFAWLTRNVSDLFNGNLKKRRLMTKDVQISVNLTPVAN
HVESNGGVGVGVVGPIGRYGEKVPDDDSYMTNPNLTISVPIAPGESDVEFPEEGEVEEET
ESSEDEDNKAEKVSLSEGSTVDLRKPGEEEDDFSETADDVMEPDECFPEFCVRHCKCCEI
NTTRGLGQAWWRLRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEKRKVVKVILEY
ADKVFSYIFVLEMFLKWIAYGFKKYFTNAWCWLDFLIVDVSLVSLVANSLGYSDFAAIKS
LRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFG
KCVNRTGFIQNASIVNNKSECLAMNDTQFYWTKVKVNFDNVGLGYLSLLQVATFKGWMEV
MHAAVDSRGVEEQPIREINLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKRKISGQD
IFMTDEQRKYYNAMKKIGSKKPEKPIPRPTNILQGFLFDLVSKQAFDIIIMMLIIVNMVT
MMVETDDQSVRMESILNKINLIFIVIFATECLMKIVALRCYFFTVGWNIFDFVVIILSIV
GIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSMPALFNIGLLL
FLVMFIYAIFGMANFAYVKKKEGIDDMFNFETFGNSMICLFQISTSAGWDNVLEPIMSNS
PEECEAYVVNTGTNVRGNCGNPSVAIAFCVSYIIISFLIVVNMYIAIILENFSVATEEST
EPLSEDDFEMFYEVWEKFDAEATQFIEFSKLSNFADNLSEPLRIAKPNKIKLISMDLPMV
SGDKIHCLDILFAFTKRVLGESGEMDALKQQMEEKFMMANPSKISHEPITTTLRRKQEDV
SAIIIQRCYRRHLVKRQMKQASFLYRQMNLQTNLNLQEHIVVDIERAPETEGLIAAMIKE
HYGPEGPVEEEEEEELVEVMGVMEGTLSSSPPSYDSVTRPGVASDVGQIERLERPRDLVL
ELREPSPSQTYREPSTSQTYREPSTSQTYRELSPSQTFEETFL
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacgctgttaccaacgggtcctgatggcttgcgccggttcactcgcgaatcc
ctggccgccatcgagcagcggattgccgaggagcaggccaagaacgccaaggattaccag
gaggatctgggcaacgtggagctgcccatgcccaggcccgacctggaggctggcaaacaa
cttccacgtatctttggtgacattcccccaggactggttggggtacctctggatgacatc
gatcccttctacttcaagaatcagaggacttttatagtagttaataaagggacggccatc
ttccggttcagtgccacgtctgctctctatatatttacccctttcgccttcctcagaaga
atctccatcaaagtcctggtccattcattattcagcttgttcattatgtgtactattctg
accaactgttgcttcatggctatgtcagaccctgccccttggaccaagtacctggagtac
acgttcaccggtatctacacctttgagtccatgataaagatatttgcgagaggattctgt
gtcggaccgttcaccttcctgagagacccatggaactggctggattttagtgtaatctcc
atggcatatctcacggagtttgtggacctgggaaacgtgtctgcgttgagaacattccgg
gtcctccgagcgctaaaaaccatctctgtcattccaggcctaaagaccatcgtaggtgct
ctgatccagtcagtgaagaagcttgcggacgtgatgatcctgaccgtgttctgcctgagc
gtgtttgccctcatcggcctgcagctcttcatgggcatcctgcgtcagaagtgcgtccgt
agcgcggcacactgcgtcaactcctcatacaacgtcaacgacaccttcacctgtaacaac
cggacctggaattccatgaacgacttcgtcaccaatgaagataatttctacaaagttgag
ggagcaaaggatgccttaatttgtggatatggacaagatgcagggaagtgtcctgaggga
tttgactgtctgagaataggaaggaaccctaactatggttataccagctttgacagcttt
ggctgggctttcctggcgctgttccggctgatgacccaagactactgggagaacctctat
catcagactctgcgttcagcagggaaaacctacatggtgttctttgtgctggtgatcttc
ctgggttccttctacctggtcaacctgatcctggctgtggttgccatggcctacgaggaa
cagaaccaggccaccatccaggaggcctggatgaaggagagagagttccagctggccatg
gaacatgtacgcagagaacagaggatggcagaaagaagaatccagcaggagacggactcg
gtcgtgtctccagagctgtccccgtttcaactaaaagcgggcagtagtttgaaacggacg
gccagtagaagatctcacaggatgctgtccgaggatccagaggacgaagcagatgggaag
tttgagccactggatgagcgggtgtcccccctgcctcccacgtctcccatgcccgtccac
cctctccttgctgccatgtcgtcccaccctctcagcacccgccgtggcagccaggccagt
atcttctccttcagaccctgtgccacctccgatgccgacttcggggatgacgagtacagt
gttcatggggacgtcatggggaggagcagggcaggctccaccatcggccccaactggcaa
cacaagcacaaaaggacaggcagcgtgaggagccattgctcccaggtcttcacccccagt
ctcaacatcaacggacgtctcaacatctccctggaccagaacggcgtcaccacggtcggc
ctgcacacccccacctccctacccgcctgcagcatggagaaggtcaaagaagataaagag
cccacctgtatagacgagtccagtgccaagccggcccagctctcccccgaggctgcagag
cctcccctccgtaggaaacgcggtctgagctccattagcttcctcagcgatgccatggat
ggtgagggtaccttcagagagctggaggagtctcgtcagaagtgccccccctgctggtac
acttttgccaaggcgtacctgatctgggacaggtgcccatggtggctgaaggtaaaggag
tatgtgaagatgattgtgatggatcccttcctagacctggcaataaccatctgtatcgtc
ctcaacaccctcttcatggccctggaacactaccccatgaccgacgagttcaacaatgtg
ctctctgttggcaacctggtgttcacggtgatcttcacagcggagatggtgttcaagctg
atagccatggatccgtactactacttccagcagggctggaacatgtttgatggcatcatc
gtctgcctcagcctcatggagttgggcctgtccaacgtagagggactgtctgtcctgcgc
tccttcagactgttgcgagtgttcaagctagcgaagtcatggcccaccctgaacacactg
atcaagatcatcggtaactccgtgggcgctctgggaaacctgaccctggtgctggccatt
atcgttttcatcttcgccgtggtgggcatgcaactgttcggcaagaactaccaggactgc
gtgtgtaagatctctaaggattgtatgttacctcgttggcacatgaaggacttcttccac
tcgttcctcatcgtgttccgggtgctgtgtggcgagtggatcgagaccatgtgggattgt
atggaggtggccgggcagcctctctgcattctggtcttcatgctggtgatggtcatagga
aacctggtggtgctgaacctgttcttggccctgctgctcagctcgttcagctcagacaac
ctgtcagctcccgacgaggacggagagatgaacaacatccagatcgccgtcgcccgcatc
cacacggggttcgcctggctgacgaggaacgtctccgacctattcaacggaaacctgaag
aagagacgtctcatgactaaagacgttcagatttctgtgaacctgacacccgtagccaat
cacgtggagagtaacggcggggtgggggtgggggtggtggggccgatcggacgctacgga
gaaaaggtcccggacgacgacagctacatgaccaaccccaacctgaccatcagcgtgccc
atcgctccaggggagtcggacgtggagttccctgaggaaggagaggtggaggaggagaca
gagtcgtcagaggacgaggacaacaaagcggaaaaagtgagcctatcagaaggcagcacg
gtggacttgcggaagccaggggaagaagaggatgacttctctgagacggctgacgatgtc
atggagccagatgaatgtttccctgaattctgtgttcgccactgtaagtgctgtgagatc
aacacgactcggggcctgggtcaggcctggtggagactgaggaagacctgttaccagatt
gttgaacacagctggttcgagacttttattatcttcatgatcctgctgagcagcggtgct
ctggcatttgaggacatctacattgagaaaaggaaagtagtgaaggttatcttggagtac
gctgataaggtcttctcctacatattcgtcctagagatgttcctcaaatggattgcctac
ggcttcaagaagtacttcaccaacgcttggtgttggctggacttcctcattgtcgatgtg
tcgttggtgagcctggtagctaactctctgggctactctgactttgctgccatcaaatca
ctgaggaccctccgagcgctgaggcccctaagggccctgtccagattcgagggcatgcgg
gtggtggtgaacgcactgattggagccatcccatccatcatgaacgtcctgctggtctgc
ctcatcttctggctcatcttcagcatcatgggagtcaacctgttcgcagggaagtttggt
aaatgtgtgaaccggacagggttcatccagaatgcctccatcgtcaacaacaagtcagag
tgcctggccatgaacgacactcagttttattggactaaagtcaaggtcaacttcgacaac
gtgggactaggatacctctcactgctgcaagtggccacgtttaaaggatggatggaagtt
atgcatgcagctgttgattcacgtggcgtagaggagcagccaatcagggagatcaacctc
tacatgtacctctattttgtcatcttcatcatcttcggatccttcttcactctcaacctc
ttcatcggagtcatcattgataatttcaaccagcaaaaaagaaagataagtggacaagac
attttcatgactgacgagcagaggaagtactacaacgctatgaagaaaataggctctaaa
aagcccgaaaagcctataccaagacctacgaatatactccaaggcttcttatttgacctg
gtatccaagcaagcctttgacatcatcattatgatgctgatcatcgtcaacatggtgacc
atgatggtggagacagacgatcagtccgtacgcatggagtccattctcaacaagatcaac
ctgattttcattgtcatcttcgccaccgaatgcctcatgaagatcgtggcacttcgctgc
tatttcttcaccgtgggatggaacatctttgactttgtggttatcattctctccatcgtg
ggtatcgttctggctgacatcatcgagaagtactttgtatctccgactctgttccgtgtc
atcagactggcaaggataggacgcgtccttcgcctgatacgtggagccaaaggaataagg
actttactgtttgccttaatgatgtccatgccagcgttgttcaacatcggcctgctgctc
ttcctcgtaatgttcatatacgctatcttcggaatggccaacttcgcttacgtgaaaaaa
aaggaagggatagatgacatgttcaacttcgagacctttgggaatagtatgatctgcctg
tttcagatcagcacgtccgccgggtgggacaacgtcctggagcccatcatgtctaactcc
ccagaggagtgtgaagcctacgtcgtcaacaccggcaccaacgtccggggaaactgtggc
aacccgtctgtggcaatcgccttctgtgtcagctacatcatcatatcgttcctcatcgtg
gtcaacatgtacatcgccatcatcctggagaacttcagcgtggccaccgaggagagcacc
gagccgctgagcgaggacgacttcgagatgttctatgaggtttgggagaagttcgacgca
gaggccacccagttcatagagttctccaagctgtcgaatttcgcagacaacctgtcggag
ccgctgcgcatcgccaagcctaacaagatcaagctgatctctatggacctgccgatggtg
agcggggacaagatccactgcctggacatcctgttcgccttcaccaaacgcgtgctgggc
gagtcgggcgagatggacgccctcaagcagcagatggaggagaagttcatgatggccaac
ccgtccaagatctcccacgaaccaatcacaacgaccctacgccgcaagcaggaagacgtg
tctgccatcatcatccagcgctgttacagacgccacctggtgaaacggcagatgaagcag
gcctcattcctttacagacagatgaaccttcagaccaacctgaacttgcaggagcacata
gtggtggacatagagagggccccggagacggagggcctcatcgccgccatgataaaggaa
cactacggccccgaggggcccgtcgaggaggaggaggaggaggagctggtagaggtcatg
ggggtcatggaagggactctgtcctcctcaccgccatcttacgacagtgtgacccggccg
ggggtggctagtgacgttggtcagatagaacggctagaaaggccgagagacttagtgtta
gaactcagggagcctagcccctcacaaacatatagggaacctagcacctcacaaacatat
agggaacctagcacctcacaaacatatagggaacttagcccctcacaaacatttgaagag
acatttctttga
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integrated database retrieval system
