Salvelinus fontinalis (brook trout): 129813677
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Entry
129813677 CDS
T11136
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129813677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129813677
Transporters [BR:
sfon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129813677
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GFIT
Other DBs
NCBI-GeneID:
129813677
NCBI-ProteinID:
XP_055722054
LinkDB
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Position
17:9470978..9586294
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AA seq
2331 aa
AA seq
DB search
MNTGSQIRLLLWKNWTLRKRQKIRFLVEILWPVVLFIGLVWLRKANPLYKQHECHFPNKA
MPSTGIIPWIQGIFCNANNPCFKHPTRAEGPGVVSNYNNCILARFWADSNELLFDDPEFQ
QLGRLWEDMAVMNNFMDTICNTPEQIAGRGLKIEDILKDDEILTAFLLRDVGLSESVVHQ
LVNAQVRPEQFAHGVPDLHLKDIACSQALLERFIIFPSRRGMYGVRNAMCALTQQRLQKI
EDVLYANVDFFKIFRLLPRVLDNHTDGPDLRYWGRVLTAVSEKVQVLFERNSTKDLLKVV
YPLFRAGGPSSFSQLMSIVSALFCGYPDGEGSRVLSFNWYEDNNYKVFLGVNGSKNRDYV
YDMTTTPFCNNLMQTLESNPVTKIVWSSVKPLFMGKILYAPDSPAIRLILKSANTTFEEL
ERLMTMGKAWEEVGPQLWRFFNAGIQINMIRDTVRNPTVADLIDRSLEDTEFSSKDILNF
LYNGLEEDREENMPSFDWRNVFNLTDQAVRMFNQYGECISLDKFMPHTDEDQLTHQALFL
LEENKFWAGLVFLDVYPWTTTVPRHVKYKIRMDIDQVERTNKIKDRYWDPGPRADPMEDL
RYIWGGFAYLQDMVEHGILKIQTGHDWPLGVYVQQMPYPCYVDDLFMLTLNRCFPIFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVTNGVIWYTWFIDSFIMMTASTALLTLIIMA
GKVLNYSNPLVVFLFLLTFTMATIMQCFLLSVFFNKANLAAACSGIIYFTLYLPHILCVA
WQDRITKNAKITASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDAYSFFTSIG
MMMFDAVLYGFLAWYLDNVFPGQYGIGRPFYFPFQPSYWQRSEPALSNIPDSDPEKPEVD
KDVDSMCSPRRCNGVGVRKPCKHQDKRERMEREREEVLKRQEEEQNNEEQEEDLTGQLFF
EPEPAGLTVGVEIQDLVKVFPGGSRPAVDHLSIAFYEGQITSFLGHNGAGKTTTMSILTG
LFPPTSGTAFIHGRDIRTDMDSIRTSMGMCPQYNILFKHLTVEEHILFYSMLKGTSQAEA
QQAVQVMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKIVILDEPTSGVDPYSRR
SIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGQLHCCGSPLFLKNCFGVGFYLT
LVRRMKDVRKKENECDCASECSCTCSTCTKVKEESQGQQLERALDGDVDNITTLIHHHVP
EAKLIEAIGQELTFLLPNKGFKHRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLKVT
ADGEAAANTKTPEQWMLLKRTKSCSKVGVDEGEPEEANGLKQANGGGNHDDDNSAGKGSS
QVKGANLVMKQFLALLVKRFHHATRSYKDFLAQIVLPASFVLIALIFTMIVPPFGEYPAL
TLTPWMYGKQFTFFSNERLENYQMRHFTKVLLNPPGLGTRCMAGTPLQNLPCENETLGWE
TPAVSSIANNILQSPEWHPLNPSPSCQCSTNKKLTMLPICPIGAGGLPPMQRKEATGDIL
LDLTDRNITDYLVKTYPSLIRQSLKSKYWVNEQRYGGLSVGGQLPILEVSPKQIQDTLSQ
LMKMLNVTGGPYTKLSLQEIGPFLRYMESEYNVKVWYNNKGWHAMVAFMNVANNAILRAH
LPRNVDPMQYGITAINHPLNLTKEQLSEVTVLKTSVDAVTAICVIFAMSFIPASFVLYLI
QERVTKAKHLQFVSGVSPLVYWLANFFWDMMNYSLSTAMVVGIFVVFDKKCYTSPTNLPA
LVLLLFLYGWSVTPMMYPMSYIFNIPSTAYVSLSCINLFIGINSSALTFILELFENNRAL
LEFNEWLKKGLLVFPHFCLGRGLIDMAMNQAVTDVYAHFGEDRAMDPFKWDFVGKNLVFM
AIEGCVYFLFTILIEYRFFLDHWLSDFRGPPPKDEDEDVAVERERIYNGGNKSDILQIRD
LCKTYSGKTRQAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVSSGEATVAGYS
ILSDMLDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPESDISRVADWGIQKLGLSE
YAGRCAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWTAIMSVIQDGRA
VVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYVVTMKVKAAKAGVSPEL
GPAESFMESSFPGCVQREKHYNTLQYEIASSSLARIFQLVVANKDKLNIEDYSVSQTTLD
QVFVNFAKQQAGEDEDVLQPRAVNARNEKQNVPTKRKVSPIKIKTRRQNKT
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggaagtcagatacgcctgctgctgtggaagaactggactctacgcaagaga
cagaagatccgcttcctggtggagattctgtggccggtggttctgttcattggtctggtg
tggttgaggaaagccaaccctctttacaaacaacatgaatgtcacttccccaacaaggcc
atgccttccacaggtatcatcccctggatccagggtatcttctgtaacgccaacaacccc
tgtttcaaacaccctacaagggcagagggccctggggtggtctccaactacaacaactgc
atacttgcgcggttctgggctgactccaatgagctgttgttcgacgacccagagttccag
cagttgggtcggctgtgggaggacatggccgtcatgaacaacttcatggacaccatctgt
aacacaccagaacagatagcaggtcgaggtctgaagatagaggacatcctgaaggatgat
gagatattgacggccttcctgctgagagacgttggcctgtcagagtctgtggttcatcag
ctggtcaacgctcaagtccgtccagaacagtttgcccacggtgttccagacctccacttg
aaggacatcgcctgcagccaggctcttctggagaggttcattatctttcccagccggaga
ggcatgtacggagtgcgtaacgctatgtgtgccctgacacagcagcgcctgcagaagata
gaggacgtgctttatgctaacgttgacttcttcaagatcttcagactgctgccccgggtg
ttggacaaccacacggacggaccagacctacgctactgggggcgtgtcctaaccgctgta
tcagagaaggtccaagtgctctttgagaggaacagcaccaaggaccttctgaaggtggtc
tacccgttgttccgggctggtggtcccagctccttcagccagctgatgagcattgtgtcg
gccctgttctgtgggtacccagacggagagggatccagggtcctctcctttaactggtac
gaagacaacaactacaaggtgttcctgggggtgaatggatccaagaaccgcgactatgtc
tacgacatgacaaccactccgttctgtaacaacctgatgcagactctggagtctaacccg
gtcactaagatcgtgtggagttcagtcaagcctctcttcatggggaagatcctctacgct
ccagactccccagccatcagactgatactaaagagtgccaacactacgtttgaggagctg
gagcgtttgatgaccatgggaaaggcctgggaggaggtgggacctcaactctggaggttc
ttcaacgctggaatccagataaacatgatcagggacaccgtcagaaaccccacggtagca
gatctaatagacaggagtttggaggacactgagttctcctctaaagacatcctcaacttc
ctgtacaacgggcttgaggaggacagagaggagaacatgcccagcttcgactggaggaac
gtcttcaacctcacagaccaggccgtacgcatgttcaaccagtacggagagtgtatcagt
ttggataaattcatgccccatacagacgaggatcagctgacccaccaggctctctttcta
ttggaggagaataagttctgggcagggctagtcttcctggatgtctacccctggaccact
accgtgccgcgtcacgtcaagtacaagatacgcatggacatcgaccaagtagagagaacc
aacaagatcaaagacaggtattgggaccctggtcccagagcagaccctatggaggatctg
aggtatatctggggtggctttgcctatctacaggacatggtagagcatggcatactgaag
atacagacaggacacgactggcctctgggagtctacgtacaacagatgccatacccctgc
tatgtagacgacctcttcatgttgactctgaaccgatgcttccctatcttcatggtgtta
gcgtggatctactctgtgtctatgacggtgaagagcatcgttctggagaaggaactacgc
ctcaaagagacactcaaggccatgggagtgaccaacggagtgatctggtacacctggttt
atagacagcttcatcatgatgaccgccagcaccgccctgctcacactgattattatggct
ggtaaagtgttgaactactccaacccgttggtcgtgttcctgttcctcctgacgttcacc
atggccaccattatgcagtgtttccttctcagtgtgttcttcaacaaggccaacctggct
gcagcctgcagcggtatcatctacttcaccctctacctcccgcacatcctctgtgtggcc
tggcaggaccgcatcaccaagaacgccaagatcacagcgagcctgttgtccccagtagcg
tttggttttgggacggagtacctgtctcgttatgaggagcagggcctgggtttgcagtgg
gacaacatcggcaccagtccactagagggcgacgcctactccttcttcacctccataggc
atgatgatgtttgacgccgtgctctatggcttcctggcatggtaccttgacaacgtcttc
ccaggtcagtatgggattggacgaccattctacttcccattccagccctcctattggcaa
aggtctgaacccgccctctccaacattccagactcagatccagagaagcccgaggtggac
aaggacgtagacagtatgtgttcacctaggaggtgtaacggtgtgggggtaaggaaaccc
tgcaaacaccaggacaagagagagaggatggagagagagagggaggaggtgctgaaacga
caggaagaagaacagaacaacgaggagcaggaagaggatctgacaggtcagttgttcttt
gagccggagccagcagggctgaccgtgggggtagagattcaggacttggtcaaggtgttt
cctgggggatcccgtccggccgtggaccacctcagcatcgccttctacgagggccagatc
acatcattcctaggacacaacggagctgggaaaaccaccaccatgtcgatcctgactggt
ctgttccctcctacatctggaacagcctttatacacgggagagacatcaggactgacatg
gacagtatccgcacatccatgggcatgtgtccccagtacaatatcctcttcaaacatctg
acggtggaggaacacatcctgttctactctatgctgaagggcacctctcaggccgaggct
caacaggcggtccaggtcatgctggaggatctgggcctgcctcataagagagacgaggag
gcacagaacctctcagggggtatgcagaggaagctgtctgttgccatggcatttgttggg
gggtcaaagattgtgatcctggatgagcccacgtcgggggtcgacccttactccagacga
tccatctgggacctgctactcaaataccgcacaggccgtacagtgatcctgtccactcac
cacatggacgaggctgacctgttgagtgaccgtgtagccatcatctctaagggccagctc
cattgctgtggctcccccctgttcctcaagaactgcttcggagtgggattctacctcacc
ctggtccggcgtatgaaggacgtgaggaaaaaagagaatgagtgtgactgtgcctcagag
tgttcctgtacctgttccacctgcaccaaggtgaaagaggaatcccagggtcagcagctg
gagagagctctggatggtgacgtggacaacatcaccacgctgatccatcaccacgtccca
gaagccaagctgatcgaggccatcggccaggagctgaccttcctgctgcccaacaagggt
ttcaaacaccgggcctatgcctccctcttcagagaactggaggaaacattgggagacatg
ggcctcagcagcttcggcatctctgacacctcactggaggagatctttctgaaggtgaca
gcagatggggaagcagcagccaataccaaaactccagaacagtggatgttgctcaagaga
accaaaagctgcagtaaagttggtgtggacgagggtgaacctgaagaggctaacggtctg
aagcaggccaacggtgggggtaaccatgacgacgacaacagcgctgggaaagggtcgagt
caggtcaaaggagccaatctggtcatgaagcagtttctggccctgctggtcaagaggttt
catcatgctaccagatcatacaaagacttcctcgcacagatcgtcctgcctgctagcttc
gtcctgatagccctgatcttcaccatgattgtgcctccgtttggagagtaccccgccctc
accctcactccctggatgtacggaaagcagttcactttcttcagtaacgagcgactggag
aactaccagatgagacatttcaccaaggtgttgttgaatccccctggcctagggactcgc
tgtatggcaggaacccctctacaaaacctgccctgtgagaatgagacattgggctgggag
acacctgcggtttcttcaatagccaataacatcctgcagagccctgagtggcacccgcta
aacccctccccttcctgccagtgcagcaccaataagaagctgactatgttacccatctgt
ccaatcggagctggggggctgccccctatgcagaggaaagaggctacgggagatatacta
ctggacctgactgatagaaacattacagactacctggttaaaacctaccccagcctcatc
agacaaagtttgaagagcaaatactgggtgaatgaacaaaggtatggaggcctgtctgtt
ggaggtcagctgcccatactggaagtcagccctaaacagatccaggataccctctctcaa
ctgatgaagatgctcaacgttactgggggtccttacacaaagctgtcgctgcaggagatt
ggacctttcctcagatacatggaaagtgaatacaatgtcaaagtctggtacaacaacaaa
ggctggcacgccatggtggccttcatgaatgtggccaacaacgccattctgagggcccac
ctgcctcgtaacgtcgaccccatgcagtacggcatcacagccatcaaccaccccctcaac
ctcaccaaggaacagctgtctgaagtcactgtgttgaagacatcagtagacgcagtgaca
gctatctgtgtgatctttgccatgtccttcatcccagcctcgtttgtcctctacctgatc
caggagagagtaaccaaggctaaacacctccagttcgtcagcggggtcagcccccttgtc
tactggttagccaacttcttctgggatatgatgaactactctctcagtacagccatggtg
gtggggatctttgtggtcttcgacaagaagtgttacacctcacccaccaacctgccagcc
ctcgttctcctgctcttcttgtatgggtggtcagtaacccccatgatgtaccccatgtca
tacatctttaacatccccagtacagcctacgtctctctgtcctgcatcaacctgttcatc
ggcatcaacagcagcgccctcaccttcatattggaactgttcgagaacaaccgggccttg
ttagagttcaatgagtggctgaagaaaggcctcctggtgttccctcacttctgtctggga
cggggactgattgacatggctatgaaccaggcggtgactgatgtctatgcacactttggt
gaggaccgtgccatggatccgttcaaatgggactttgtagggaagaacctggttttcatg
gctatagaaggatgtgtctatttcctcttcactatcctcatagagtaccgcttcttcctc
gaccactggttatcagacttccgagggcccccgcctaaagacgaggatgaggacgtggcg
gtggagagagagaggatctataacggcgggaacaagagtgacatcctacagatcagagac
ctctgcaagacgtactctgggaagacgagacaagcggtggacaggatctgtgtgggcgtg
cctgcaggagagtgttttggtctgttaggagtgaacggagctgggaaaaccaccactttc
aagatgttgactggagacacagacgttagttctggagaggccactgtcgctggatacagt
atcctgtcagacatgctggacgtgcaccagaacatgggctactgccctcagtttgacgct
atagacgacctgctgacaggcagggaacatctgtacctctacgctcgcctccgaggggtc
cctgagtcagacatcagtagagtggcagattggggcatccagaagctcggcctatcagag
tacgctggtcgctgtgcagggacatacagcggaggcaacaagaggaaactctccacagcc
atcgctatgattggttgcccagccctggttctactggatgaacccactacaggtatggac
ccccactcccgacggttcctgtggactgctattatgagcgtcatccaggacgggagggcc
gtggttttgacatcacacagcatggaggagtgtgaagctctgtgcactcgtttggccatc
atggtcaacggcaccttcaaatgtctggggaccatacagcacctcaaatacaagtttggt
gacggctacgtggtgaccatgaaggtaaaggcagctaaagcaggtgtatctccagagctg
ggtccagcggagagcttcatggagagcagcttcccggggtgtgtccagagagagaaacac
tacaacactctgcagtatgagatcgcctcctcctcactggctaggatcttccagctggtg
gtcgccaacaaggacaaactcaatatagaggattactctgtatcacagaccacactagat
caggtgtttgtgaactttgctaagcaacaggcaggagaggatgaggacgttttacaaccc
cgagcggtcaacgcgcgcaacgaaaaacaaaatgtccccacgaaacgcaaggtctccccc
atcaagataaaaaccagaagacaaaataaaacttga
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integrated database retrieval system
