Salvelinus fontinalis (brook trout): 129813749
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Entry
129813749 CDS
T11136
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129813749
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129813749
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129813749
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129813749
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129813749
Membrane trafficking [BR:
sfon04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129813749
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129813749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
129813749
NCBI-ProteinID:
XP_055722218
LinkDB
All DBs
Position
17:complement(14252565..14273855)
Genome browser
AA seq
1630 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYMNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRECLGKSCSTPAKDSDEDEKSTDSVLC
PTPTETQRSSTKLPMSVCAPGAGGSPDTAQAQESSEMTDSSGLRAALQEADSPERANPPS
FNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLSECRDTIAKLDNQNMKAIK
GLEDRLYALDQMIASCNKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIM
LTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERV
RVVDALSTVPQMYCLAVVEVVRRKIFIGHYREWACALVKDGKRLYETEKYKRETFGKLFR
KSFLRNRLFRGLDSWPPTSFCTRKPRKFDFELPDISLGDLQYLKTCCPTEVQPFLRLPTL
CDFEPLHQHVDMLQQLVLATQAASVDEMSRTITNLLSEQRVSCSQSAQRSTAAVTLLTTR
SNSTPGTTFTSSMTPSSLSLPGPLCQPLPGHGPTMLEDLSPDSIDAQTFDFETIGHPNMD
LVLQQASSLDLDSLAESPESDFMSAVNEFVIENSPTPTSPGMMVESLYSSVINAIDSKRM
HDTTTLERENSKMAVLKLSMEKYRTAAEESQTNLRFVKDDLYRHRDLLLKEQRDFGFALK
TMTIEVRNMVDTIRKREEEEHQAELLSLQQDHENQLQDLMEENQVNKNIVKEVQRAMLEL
EGLLEHKKKELTQLEVEREDWAEAENGHTQTARVLEQKISDQAQEVQTLAASRDSLASQL
ETLHIEIERGQQKIRQELEGAKQSHLQELEERMRHQHQAQLDTLARENQEALEHLATENR
AKLSEVTDLHTATLTERDCQLRDLEARVIELADLRCKLEVELALKESETEEVRLLYEEAK
QGQQEANVGKATVEAETQSLSEQLAQVNRQLQAKNGEYETDLSELRRLMEKDQCISELVD
RHEEERNQLHRELTALQQQTLDTERSQVEQLQNLQRDLDLQRVALCEDKEKQRGSSEEQE
QHLRTVIYDLQVENDLLAKRIEQDTQTAQERLEKEMALKAAVPDVFKDLKQQKVEMEKRL
LDKIRQLECDLQERQSSEREAGLSEVQTEGRGSDAGAPLSLDSALQEHLQQETASLHTQM
ELLERRKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLRKVTQQQEKDKG
LIETLSEDRAIVMQEKKQLEEDLNRLRSTALVSSAYYSPNLLALEPTGAGPGPGTEVEVG
AGACYSEPFLDTDRLASVAAIREDDKVDSAVEASMVTVHDNILMMSEEKQRILLLERTLH
MKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTL
YFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYR
VKAVSWNKKV
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggaagcactctgacatttgacacagagctt
gctgtccaaacagtgttggacctcaaacatgccatccaggtcaagtacaagattgcaacc
cagcatcaagtcctggttgtcaatggaggggagtgtatggttgcagagaggcgtgtctgc
agctacagtgctggcacggacaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggctccgactatccccaaaaccacattctctattgagaatgagatggagctc
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctcgcgaacacaa
cttgctgtggaaatgtttgaagttgccaagaaactttgctctttctgcgaacgcctggtt
cacgatgaacacctccaacaccaaggctgggctgccatcatggccaacctggatgactgc
acgctgtcctatcagaagctactgtggaaatttgacacagcatacatgaattatcaacaa
gactttgaggatatcaaattgaaactgacaaaactggggacagcagtctcagtcatggcc
aagatccccctactggagtgtctgacccgccacagctacagagaatgtctagggaagtcc
tgctccactccagccaaggactccgatgaggacgagaagtccactgactctgtgctctgc
cccacccccaccgaaacacaaaggagctccaccaagttacctatgtcagtttgtgctccg
ggggcggggggctcacccgacaccgcccaagcccaggaaagcagtgagatgactgacagt
agtgggctgagggcagcccttcaggaggcagactctccagagagggccaaccccccgtcc
ttcaacgtcacactgctggactggatcaacgttcaagaccggcccaatgacgtggaatca
gttgtgaggaaatgctttgactccatcaataggctcgacccacggatcattcaaccattc
ttgtcggaatgtcgagacacgatagccaaactggataatcagaacatgaaagccatcaaa
gggcttgaggacaggttatacgctctagaccaaatgatcgcaagctgtaacaagttggtc
aatgaacagaaggaacttgctcagggatttctggccaatcagaagcgtgctgagaacctg
aaggatacgtccgtgctgcctgacctgtgtcttagtcacgccaaccagctgatgatcatg
ctgaccaaccaccggaagctgctggacataaaacagaagtgcaccactgccaaacaggaa
ctggcgaacaacctacaggttcgactcaaatggtgctgctatgtgatgctgcacgcggat
caggatggagagaagctgcaggccttgctgaggctgctgacagagttgatggagagggtc
cgggtggtggacgccctcagcaccgtgcctcagatgtactgcctggccgtggtggaggtg
gtccgcaggaagatcttcataggccactacagagagtgggcctgtgctctcgtgaaggat
ggaaaacgtctctatgagactgagaagtataaaagggaaacgtttggcaagttgttcagg
aaatcctttctcagaaatcgcttgtttagaggacttgactcatggccccccacttcattt
tgcacgcgaaagcctagaaagtttgactttgagcttccagatatttcccttggtgacctg
cagtacttaaagacctgttgtcctacagaggtgcagcctttcctcaggcttccaacactg
tgtgactttgagcctttgcaccagcacgtggacatgcttcaacagttggtgctagctact
caagctgccagtgtggacgagatgtctcgaactatcactaacttgctgagcgaacaaagg
gtgtcgtgcagccagagtgctcagagatccacggcagcggtgaccctgttaaccacgcgg
tccaacagcaccccggggaccacctttacctcctccatgaccccatcctctctcagtctc
ccaggcccactctgccagcccctccctggccacggccccaccatgctggaggacctgtct
ccagacagcatcgacgctcaaacctttgactttgagaccattggccaccccaacatggac
cttgtcctgcagcaggccagttccctggacctggactccctggctgagagccccgagtca
gacttcatgtcggcggtcaacgagtttgtgattgaaaactcgcccacccccaccagccca
gggatgatggtggagtcgctgtactcttcggtcatcaacgctatcgacagcaagcgcatg
catgacaccaccactttagagagggagaactccaagatggccgtgctaaagctgagcatg
gagaagtaccgcactgccgccgaggagtcccagaccaacctgcggttcgtcaaggatgac
ctgtaccgccacagagacctgctgctgaaggagcagcgagactttggtttcgccctgaag
accatgaccattgaggtgcgcaacatggtggacaccatccgtaagagagaggaggaggag
caccaggctgagctcctctccctgcagcaggaccacgagaatcagcttcaggacctgatg
gaagagaaccaggtcaacaagaacattgtgaaagaagtgcagcgggccatgctggaactg
gaggggctgctggagcacaagaagaaggagctcacccagttggaggtcgagagagaggac
tgggccgaggcagagaacggacacactcaaacagccagggtcctggagcagaagatcagc
gatcaggcccaagaggtgcagaccctggctgcctccagagactccctcgccagccagctg
gagacgctgcacattgagatcgagcgcggccagcagaagatccgccaggagctggagggg
gccaagcagtcccacctgcaggagctggaggagaggatgaggcaccagcaccaggcccag
ctagataccctggcccgggagaaccaggaggccctggagcatctggccacagagaacagg
gccaagctgagcgaggtcactgacctgcacaccgccaccctgacagagagggactgccag
ctgagggacctggaggcccgggtcatcgagctggctgacctgcgctgcaagctggaggtg
gagctggccctgaaggagtctgagacggaggaggtgaggctgctgtacgaggaggccaag
caggggcagcaggaggccaatgtggggaaggccaccgtggaggctgagacccagtccctc
agcgaacaactagcccaggttaacaggcagctgcaggccaagaacggggagtacgagaca
gacctgtctgagctgaggaggctgatggagaaggaccagtgtatctctgagttggtggac
aggcacgaggaggagaggaaccagctccacagagagctgactgccctgcagcagcagacc
ctggacactgagaggagccaagttgagcagctgcagaacctccagcgagacctcgacctg
cagagagtggcactgtgcgaagataaggaaaagcagcgggggagttctgaggagcaggaa
caacacttaaggactgttatctacgatttgcaggtggagaacgacctgctcgccaaaaga
atagagcaagacacacaaacagcccaggaacgtttggagaaagagatggccttgaaggct
gctgtaccagatgtctttaaagacttaaagcaacagaaggtggaaatggagaaaagactg
ttagacaaaattagacaacttgaatgtgaccttcaggaaagacaatcctctgaaagagag
gcagggttgtcggaggtacagacagagggtcgggggtctgatgcaggggctcctctctcc
ctggactctgcattgcaggagcatctgcagcaggagactgcctcgctgcacacccagatg
gagctcctagagaggaggaagaacgaggagatgcagaacctcaagacctccctcattgca
gaacaacagactaacttcaacactgtgctgacgagagaaaagctgaaaaaggaacagatc
atcaatgatctgacagagaagctgcgaaaggttacccagcaacaggagaaggacaaaggt
ctaatagagacactgtctgaagaccgggccatcgtcatgcaggagaagaagcagttggag
gaggacctgaaccggctgcgcagcaccgccctggtgtcctcggcctactacagccctaac
ctcttagctctggagcccactggagccgggcctggtcctgggactgaagttgaggttggg
gctggagcctgctactcggagcccttccttgacacagacagactggcctctgtggccgcc
atcagagaggacgacaaggtggactcagctgtggaggccagtatggtgaccgtacacgat
aacatcctgatgatgtccgaggagaaacagcggatactgttacttgagaggactttacat
atgaaggaagaggaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcctcg
gtgtcgtcacggcattcagagaaaatcgccatcagagatttccaggttggtgacttggtt
ctgatcatcctagatgaaaggcatgacaactatgtactgttcaccgtgggtcccaccctg
tacttcctccactccgagtccctcactgcactggacctcaaaccagatcctatgtttact
tcagcatcaggagcctcaagacgcccgtgggttcttggaaaagtgatggagaaggaatat
tgccaggcgaaaaaggctcaaaaccggttcaaagttcctttgggcaccaagttctacagg
gtgaaagctgtttcatggaacaagaaagtataa
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integrated database retrieval system
