Salvelinus fontinalis (brook trout): 129813855
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Entry
129813855 CDS
T11136
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129813855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129813855
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129813855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
HTH_Hrp3
RcpB
Motif
Other DBs
NCBI-GeneID:
129813855
NCBI-ProteinID:
XP_055722405
LinkDB
All DBs
Position
17:complement(17130622..17155942)
Genome browser
AA seq
2582 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPDDAFTDPVEEALKLALGQVDPPSEPTPDLSSPALSIPVA
APTIPDPVRVQQLAPVPVALPQTVSIATTVPQTTLSVASNTSGAATVLLGSSLTVNSSTG
TTQHITTQQFTTQQLTQIAQQLTPQQLAAITQQAGGQGGAKIVILKGPGGQAQVLQAVAG
TGSQAGKVTFARVLSGTQLRPGMQILSGGTVLNQASPGQGQVKVGTGVQRLVQSPNGPLK
QVQLISIPQGQSQSQTQTVQVQIPQAQLAQAQVQLQTQGQATQIQLQPQTQVQLQSAMQT
QVTAAATGTTTVRPQGVTLTTVPQQGEAKRITLVLQQPQGGAVQGGAVTVGGSGQLQQGQ
QQRLVLGNLPGKLVLQGGQLAALTQARAGQMGAQPKVLTIQLQVQQQPNQQGGPKFQLVS
GGQGSSPQVVQISQGQGGQRLAVPLKLLLQPQTNATSTAGRAVSVVKVINTSAAGSAPST
TTMSSPGIRLAKAQEPVRRLETLCKQEKANRIVAEAIARAKARGERNIPRVLNQDELPAG
QKAADQGAAATTTGTPGAKKKGGGSKKKSPVAAAGKGGAGAEKKGKAKAAGGAAGGTLGG
AAGTGCSKSKSKAKINTITLVGGKKRKRNASSDHSDGELSPASPSKALDEDMLAKRRSNR
QVKRKKYTEDLDIKITDDEDEPEEDVDVTTTTAAVASITGGGTGQLMGEQLKQELQLDGD
SLSSMQFFVENPNEEDAAIVDKVLSVRLTKKEVSPGHYINAEEFFVKYKNYSYMHCEWAT
LEQLERDKRIHQKLKRFKAKHAQMRLLLQEEEEPFNPDYVEVDRILDESNSVDNGEPVVY
YLVKWCSLPYEDATWELREDVDEGKVEEFRKIQDRQPQLKRTPRPQAAAWKKLEEFREYK
SGNVLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSISLLSEVFGAGVQGPFLVIA
PLSTITNWEREFATWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFDALITT
FEMILSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEE
LFSLLHFLEPAQFSSESEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQE
TIIEVELTDVQKKYYRAILERNFSFLSMGATSNSNVPNLLNTMMELRKCCNHPYLITGAE
EKIVAELRDVYDPVAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDIL
EDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCV
IFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM
SGNKESNVNGQIQQFSKKEIEDLLRKGAYAAIMDEEDEGSKFCEEDIDQILQRRATTITI
ESEGKGSTFSKASFVATENRTDIALDDPEFWQKWAKRADIDFDSMNRKNTLVIDTPRVRK
QTRQFATLRGEGGEISDPDSDDEYPPANSRQSRSARRSERHTGNGYGRTDCFRVEKHLLV
YGWGRWRDILSHARCKRRLGERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGR
EPHTLLNHSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQC
NKVLLRVRMLYYLRQEVIGEHADSVLRGADARDIDIWMPEMEQLEVPSGWWDTEADRSLL
VGVFKHGYEMYTTMRADDCLCFLERAGRPDDQAIDAEQHSADAELGDGGDDDKYSEDPEF
KPALRHTKDLYEEADSLNMDDDICVEDKAGPVKTKGPPSGQSGACEWPTSSSLTARLRRL
ITAYQRSYRREQLKVEAAEKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVST
FGVERIKKEADAPEGEEAELEWARFRTFARLEKKTDESLSRYFRCFMAMCRRVCNLRPAR
GDPSELGQSLAPITEERASRTLYRISLLRRLREHVLPHPSLEELLLLAPPSSELPAWWST
PAHDRELMLGSTLHGVSRTELSVFLDPQFSFSQARHDYLENQHNQPAPATPLLQPQAEEG
SVVKDEEGLDKESRILGGSEALGHSDTQITPLSRPDGKGRARPGMIWKKSRGREPRSGGS
KGERSVGGVSDSDSDSDSGSSTSSQRSGSSDDSGDSDTERERAALKMEEDGENSLLSMTP
SQDGAPPESITDPFRVDWPKDRVLINRLDSLCTLVLSGQWPTGRRYASDAQLNPGSDDLG
AGDELSFARLMRKGNNTPGGEGGDGQESEFTVKLLKEEGLKLTFSKHTLMSNGSGGEGSG
RRKRRDQELSDPDGAVPVVDAMTGTVLSGERAPRRRDLPNWLKENPDYEVEGDMLELLVN
RKKRRRKKRTEKTAALSGSETVKVIDMRTGKKVGAAYGPMLQDLREFLEENPDCAVAPEW
AEMVQSSGFLPDSLFHRLLSARSVIPKRVRRRHHHHHHAPQPAPLEDPVLGGGEETLVSD
GAYMMEDEDLENSPFLTQAFDVKMEGGDSLSQGGYESSDREALLDNVIMAQKDSDSSSSS
ED
NT seq
7749 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgatgacacgccactgtttaacctggatgccctg
ccagacgatgccttcacagaccctgtggaggaggctctgaaactggctctggggcaggtg
gaccccccctccgaaccaaccccagacctctcctccccagcgctcagcataccagtggca
gctccaaccatcccagacccagtacgtgtgcagcagctggccccagtcccggttgccctc
cctcagactgtttcaatagctacaacagtacctcagacaacactctctgtagccagtaac
accagtggggctgccacagtcctgctgggctcgtctctgactgtcaatagctctactggc
accacgcaacacatcaccacacaacaattcaccacacagcagcttacacagatcgcacag
cagcttactcctcagcagctagctgccatcacccagcaggccggaggccagggaggtgcc
aagatcgtcatcctgaaaggacccgggggacaagcacaggtgctgcaggctgttgctggg
acaggctcccaagcggggaaggtcacctttgccagggtactgtctggaacccaactcagg
cctggcatgcagatactgtctggaggaacggtcctgaaccaagcgtctcctgggcaggga
caggtaaaggtgggaactggggtacagaggctggttcagtcgcccaacggacccctgaag
caggtacagttgatctccattcctcagggccagtcccaaagccagactcagactgtccag
gtgcagataccgcaagcccagcttgcccaggctcaagtgcagctgcagacccaaggacag
gcaacacaaatccagctacagccccagacacaggtgcagctgcagtctgccatgcagaca
caggtcaccgctgctgctacaggcaccactacagtccgaccacaaggggtcacccttact
acagtaccacaacagggtgaagccaagaggatcaccctggtgctgcagcagcctcagggg
ggtgccgtccaggggggtgctgtgacagttggtgggtcgggtcagctgcagcagggccag
cagcagaggctggtgttgggtaatctcccagggaagctggtcctccaggggggtcagcta
gctgctctcacccaggcaagggcagggcagatgggggcacagcctaaagtgctcaccatc
cagctgcaagtgcagcagcaacccaaccaacaggggggacccaagtttcagctggtgtcc
ggagggcaaggaagtagcccacaggttgttcagatctcccagggccaaggtggacagaga
ctagccgtgccgctcaaactgctgctgcaaccacagacaaatgccacctcgacggcaggc
agagctgtctccgtagtgaaggtcatcaacacctcagctgccggctccgccccttccacc
accactatgtcgtcaccagggatacggctagccaaggcccaggagcctgtacgtcgtttg
gagaccctgtgcaaacaggagaaggccaaccgtattgtggctgaggccattgccagggcc
aaggcccggggagagaggaacattccacgagtcctcaaccaggatgaactgcctgccgga
caaaaggctgctgaccaaggggccgctgcaacaaccactggcacacctggagccaagaag
aagggaggagggagtaagaagaagagcccagtggcggcagcagggaagggcggggctggt
gcagaaaagaaaggcaaagccaaggcagcaggtggggctgctggtgggacacttggaggg
gcggctggaaccggctgcagcaagagcaaaagcaaggcaaagatcaatacaatcactcta
gtggggggtaagaagaggaagaggaatgcctcctcagaccactctgatggggagttgagc
cccgcctctccctctaaggccctggatgaggacatgcttgcgaagaggcgttctaaccgt
caggtgaagaggaagaaatacactgaggatctggacatcaaaatcactgacgacgaggac
gaaccggaggaggacgtggacgtaaccaccacgacggcggcggtggcgtccattaccgga
ggaggaacggggcagctgatgggagagcagctcaaacaggagctgcagttggacggggac
agcctttccagcatgcagttctttgtggaaaaccccaacgaggaagatgcagcaattgtt
gacaaagttttgtccgtgaggttaactaaaaaggaggtgtctccaggacattacatcaat
gctgaggaattttttgtcaaatataagaactactcctacatgcactgtgagtgggccact
ctggagcagctggagagagacaagaggatccatcagaagctcaagagattcaaggccaaa
catgcacagatgagactcctcttacaggaggaagaggagcccttcaacccagattatgtg
gaggtggaccggatcctggatgagtccaacagtgtggacaatggagagccggtggtgtat
tacctggtgaagtggtgctctctgccctatgaagatgctacctgggagctaagagaggat
gtggacgagggcaaggtggaggagttcaggaagatccaagaccgccaacctcaactcaag
agaacgccccggccccaagccgctgcatggaagaagctggaggaattcagagagtacaag
agtgggaacgtactccgagaataccagctagaaggagtcaactggctgctcttcaactgg
tacaacaggcagaactgtatcctggcagatgagatgggtctagggaagaccatccagtcc
atctctctgctgtccgaggtgtttggtgccggggtccagggccccttcctggtcatcgct
cctctctctaccatcaccaactgggagagggagtttgccacctggactgacatgaacgcc
atcgtctaccacggcagcctggccagcaggcagatgatccagcagtacgagatgtactgc
aaggatgacaaggatcatctgatcccaggggcgtataagtttgatgccctgatcaccacg
tttgagatgattctgtccgactgccctgagctaagggagatctcctggcgctgtgtgatc
attgacgaggctcaccgcctcaagaaccgcaactgcaagctgctggacagcctcaagatg
ctggacttggagcataaggtgcttctaactggtacccccctccagaacacagtggaggaa
ctcttcagtctgctgcacttcctggagccagctcagttttcatcagagtctgaattcctt
cgtgactttggagacctcaaaacagaggagcaggtccagaagctccaggccattctgaag
cctatgatgctgcgcagactcaaagaggacgtagagaagaacttggcgccaaaacaggag
accatcattgaggtggagctgacagatgtgcagaagaaatactaccgggccatcctagag
aggaacttcagtttcctcagcatgggagccaccagcaacagcaacgttcccaatctgctc
aacaccatgatggagctacgcaagtgctgcaaccacccctaccttattaccggggcagag
gagaagattgtggctgagctgagggatgtttacgaccccgtggccccagactttcacctg
caggcgctggtgagatccgcaggcaagctggttctgctggacaaactgctgcctcgcctg
aaggccgggggacacaaggtgctcatcttctcccagatggtgcgctgcctggacatcctg
gaggactacctcatcaacaagagatacctgtacgagcgtattgatggcagagtgagaggg
aacctgcgtcaggcagccatcgaccgcttcagcaaaccagactcggaccgttttgtcttc
ctgttgtgtacccgggctggaggtctgggcatcaacctgactgctgctgacacctgcgtc
atctttgactccgactggaaccctcaaaacgacctgcaggctcaggcgcggtgtcaccgt
atcggccagtcgaaggcggtgaaggtctaccgtctgatcaccaggaactcttatgagagg
gagatgctggacaaggccagcctcaaactaggtctggaccgggctgtactgcagagcatg
agcggtaataaggagagcaacgtcaatggacaaatccagcagttctccaagaaggagatt
gaggacctcctgaggaagggtgcgtacgctgccattatggacgaggaggacgagggctcc
aagttctgtgaggaggacattgaccagatcctccagaggagagccaccaccatcaccatc
gagagcgagggcaagggctccaccttctccaaggccagcttcgtggctaccgagaacagg
accgacattgccctggatgaccccgagttctggcagaagtgggccaagagggcagacata
gactttgattccatgaataggaagaacaccctggtgattgacacgcccagggtgaggaag
cagacccgtcagtttgccaccctgaggggcgagggtggggagatatctgaccccgatagc
gacgatgagtacccgcccgccaattcccggcagtcccggtccgctaggcgctccgagcgc
cacaccggaaacggctacggccgcaccgactgcttccgtgtggagaaacatctgcttgtt
tacgggtgggggcggtggagggacatcctgtctcatgcacgctgtaagcggcgcctcggg
gagcgagatgtggagaccatctgcagggtcatcctggtcttctgcctgctgcattaccgt
ggagacgagaacattaagagcttcatctgggagctcatcaccccgccggagaacggccgg
gaaccccacacactcctcaaccactctggtttgtccatccctgttcctcggggcaggaag
gggaagagggtgaaggctcagagctcctttgatgttcagaaggtggagtggatccgcaag
tacaaccccgactccctgcttctggacgacagctaccgcaaacatctcaagcaccagtgc
aacaaggtgttgctgagagtacgtatgctctactacctgagacaggaagtcattggagaa
catgctgattctgtgctgagaggagctgatgccagggatattgacatctggatgcctgag
atggagcagcttgaggtgccatcaggttggtgggatacagaggcagaccgctctctcctc
gtcggagttttcaaacatgggtatgagatgtacaccactatgcgtgccgacgactgtctc
tgtttcctggagagagctggtcgccctgacgaccaggccattgatgctgagcagcactct
gcagacgcagagctgggagacggaggagacgatgacaagtattctgaagacccggagttc
aagcctgcgttaaggcacaccaaagacctatacgaggaggccgactccttgaacatggat
gatgatatctgtgtcgaggacaaggcagggcctgttaaaaccaaggggccgccctctggc
cagtccggagcctgtgagtggccgaccagctcatcacttaccgcgcggctccggcgtctg
atcacggcataccagcgcagctacaggagagagcagctgaaggtggaggcagcagagaag
ggcgaccgcaggcgcaggaggtgtgagcaggccagtaaactgaaggagattgcacgccag
gaacgccaacagaggtggacccgtagagaggagtgtgacttctaccgtgtggtgtccacg
ttcggtgtggagcggataaagaaagaggcagatgccccagagggggaagaggctgagctg
gaatgggctcgcttccggacatttgcccgtctagaaaagaagactgacgagagtctgagc
cgttacttccgctgcttcatggctatgtgccggagggtgtgcaacctgcggcccgcccgc
ggagacccttcagagctgggccagtctctggccccaatcactgaggagcgggcctctcgc
accctgtaccgcatcagcctgctgcgccgtctccgtgagcacgtcctgcctcacccttcc
ctggaggagctcctcctgctggccccgcccagctccgagctgcctgcctggtggagcact
ccagcccatgaccgggagctcatgctgggttccaccctccacggcgtcagccgcactgag
ctctcggtcttcctcgacccgcagttctcattcagccaggcccgccacgactacctcgag
aaccagcataaccagcccgcccccgccactcccctcctccaaccacaggcagaggagggc
tcagtcgtcaaagacgaggagggtctggacaaggagtcccgcatccttggaggctctgag
gctctcggccactcagatacccagatcacacccctctcccgtcccgatgggaagggccga
gcccggcctggcatgatatggaagaagagcagggggagagagccgagaagtggaggaagt
aaaggagaaagaagtgtaggaggggtttccgattccgattcggactctgattctggctcg
tctacctcctcccagcgatcaggcagctctgacgacagtggtgacagtgacacagagagg
gaaagagctgctttgaagatggaggaagatggtgagaacagcttgctctcaatgactcca
tctcaagatggcgcgccaccagagtccattaccgaccccttcagggttgattggcccaag
gaccgtgtgttgataaaccggctggacagcctctgtaccctggtgctgtctgggcagtgg
ccaacagggcggcgctatgcctctgacgcccagctcaacccaggctctgacgacctaggg
gcaggtgatgagctcagctttgcacggctcatgcggaaaggcaacaatacgcccggtgga
gaaggaggagacggacaggaatctgagttcaccgtcaaactcctgaaggaggaggggctg
aagctgaccttctctaagcataccttgatgtccaatgggtcagggggagaggggagcgga
cgcaggaagcgtagggaccaagaattgtcagatccagacggagcggtcccggtggtcgat
gccatgacgggcacagtgctgagtggggagcgagcccctcgccgcagagacctgcccaac
tggctgaaagagaacccagactatgaggtggagggagacatgttggagctccttgtgaac
cggaagaagaggaggaggaagaagaggactgagaagaccgcagcactgtcgggcagtgag
acggttaaggtcattgatatgaggacaggaaagaaggttggggctgcgtatggacctatg
ctgcaggatctgagggagtttctggaggagaaccctgactgtgcagtggcaccagaatgg
gctgagatggtccagagctctggctttctgccagacagcctcttccaccggctcctctct
gcacgctctgtcatccccaagagagtccgccgccgccaccaccaccaccaccatgctcct
cagcctgccccgctggaggacccagtcctgggcggaggtgaagagaccctggtctcagat
ggggcctacatgatggaggacgaagacttggagaattcccctttcctgactcaagctttt
gatgttaagatggaaggcggcgacagcttgtcacaagggggatacgagagttctgacagg
gaggcccttttggacaacgtcatcatggctcagaaggactcagactcttcctccagctca
gaggattga
DBGET
integrated database retrieval system
