Salvelinus fontinalis (brook trout): 129813864
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Entry
129813864 CDS
T11136
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
sfon03015
mRNA surveillance pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129813864
09122 Translation
03013 Nucleocytoplasmic transport
129813864
03015 mRNA surveillance pathway
129813864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129813864
03041 Spliceosome [BR:
sfon03041
]
129813864
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129813864
Spliceosome [BR:
sfon03041
]
Complex C
Other components
EJC/TREX
129813864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
129813864
NCBI-ProteinID:
XP_055722419
LinkDB
All DBs
Position
17:complement(17302708..17325556)
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AA seq
2058 aa
AA seq
DB search
MADIEDVKLDGRPLQSLRVADLKAALEERGLPKSGQKNTLVKRLKGALMLENLQRTSHHH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAVEDDDTDKEDHTKDNNSSA
CAAPDQDVLVDQHKLFGLSEGKGLAGPASEGEGHMSRDGHVSAPPAPTSAAVASLAVRVG
EQRPERVPTSSQVPADSDDDGADEDWDSGARRRNLGEPPRGQLARVRSGGSRQHPQHIPP
LLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPARQRTSSTSSSGSSSSGSCSSS
PDPQSNTERKPGPLTLLARKMASEGAFSGVGWHGRGDAERQDNNAATATMSSGRGPQDGT
VSAITHTTNAAASLPFPRLVPVTNQGVLGGHLPHSEVPVSVLRPTIMEERDAAWQQENKE
KELQAEREREKSPEQERLGAMEQERLERQRIFEQQRAVEQERERALERERKEREKALARE
RKEREMALEREKALEQERKERALARERAQALEREEEEREKALAKEREEREKAMQLEKQRA
MERERALEQEREREEKAALEREREEKAALEREREEKAALEREREEKAALEREEKAALERE
EKAALEREEKAALEREEKAALEREEKAALEREEKAALEREEKAALEREEKAALEREEKAA
LEREEKAALEREEKAALERERMVKVLELERQKALEREMREKEREEKVRALEQERIEREKA
LEKERTMEKEREERERALEQEKVLQREKEKALEQEMREKEREEKVRALEQERIEREKALE
KERTMEKEREERERALEQEKVLQREKEKALQREKEEKERALEQENVLQREKEERERALEQ
EKALQREKEEKERALEQEKALQREKEEKERALEQEKALQIEKEERERAFEQEKALQREKE
ERERALEQEKALQREKEEKERALEQEKALQREKEEKERALEQEKALQREKEERERALEQE
KALQREKERALEQEKALQREKEERERALEQEKALQREKEEREKALEQEKALQREKEEKER
ALEQEKALQREKEERERALEQEKALQREKEERERALEQEKALQREKERALEKEKVLQREK
EERERALEQEKALHRERERALEQEKASQRERERALEQEKASQRERERALEQEKASQRERE
RALEQEKASQREKEKRESHLPPWKRSREFGLTPLPTPPLSTGAGKMAATEEGGEPKVPSL
PQKALRDNQPAESGTPLSQSLAMSLSPQSSFKKFRFLRDPIVLSQSSASGIIKRPRTFSE
RHHPQSLALQSPSKFGEPEQEGTQQGSQPSAGQAAPKKPARQGVLVSGADTSGTTGPERE
TRVISTLGKSPEEEKGQSLVSEEHVQAHREETDKQVVGETAREAKAPSGPAGAVLPPSPQ
PVEGKVEKGRERSQKKEEKLGRRSSSSNDSSDSGSSSSGSSGSSSSQGKTHTTPSGRRPE
KPQTNTISQDTETVSQPEDPTEAPKAPQHKKRVSGEEKEDINIVGARHWKKPFLGIHAGE
DNGQKDSEGEEVKTDTTREVNEAAMAEPKKAPESSEECETPKTFTARRISLSSSKASPGA
VSAEGETESGAGRKRRWGSSTAVTAKKSSMSITTDSLKSLIPDIRLCPGQEMVVDLHPEE
DHLSGVEEEGRERGEQDLKIRRTVTQVVPSVTQENGQKESKRSQHEEEDREDGGEVKGDR
EEKMDGSFQRDSLETQCPSPTSHDMEMKTVTPSDTLIRRSISQQKSGVSITIDDPVRTAK
QPSPPRGKLSNIVHVSNLVRPFTLGQLKELLGRTGTVLEDGFWIDKIKSHCYVTYSSAEE
SIATRAALHGVKWPQSNPKFLSLDFIQQEELDFQRGLPPPERAGEAERGAAAVPGRGAAL
PPLLPEREQWAEREREMEHRERTRAEREWDRDKVRDLGPGKPGEEAVPRRSRSRERKRKE
RKMDKKEKAADELPVKLLDELFNKTKAAPCIYWLPLTEEQFAQKETARQERMKRRKEQQE
EVEKKREEERKERMKAASVASGERGEGERYREREGDWGRDGESGKHREDCYRRPGGSSAG
GARRSRSRSDPPPRDRRR
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcgaagacgttaaactggacgggaggccgctacaatctctccgcgtggcg
gatttgaaagctgctttggaggagcgcggacttcctaaaagcggacagaaaaatactctc
gttaagagactcaaaggggctctcatgctggagaacctccagagaacctcacaccatcac
ataggactgcagccaaactcccagattggtgaagagatgagccagaacagcttcataaag
cagtatttggcgaaacagcaggagctcttgaggcagcgtctggagagagaagcccgtgaa
gcagttgaagatgatgatacagacaaagaggaccacacaaaggacaataacagctctgcc
tgtgctgccccagaccaggatgtgttggttgaccagcacaagctttttggcctctctgag
ggaaagggactagcaggcccagcaagcgagggagaggggcacatgtccagagacggccat
gtgtctgctccacctgcccctacctctgctgccgttgcctctctggctgtgcgtgttggt
gagcagagaccggagagagtcccaacctctagtcaagtcccagcagatagtgatgatgac
ggcgctgatgaggactgggatagcggtgccaggaggaggaatctaggagagccaccaaga
ggccaactagcaagagtgaggtctggaggatcccgccaacacccacagcacattcccccc
ctattgtctccgcagcttcgacagcctacccctcctccctcccctcccccagagttatca
ttcccactgcctgatacccctaaacaaagcccccctagtccaggtgagcccccagctaga
cagcgtacttccagtacctccagctctggctcctctagcagtggcagttgtagtagcagc
ccagatccacaaagcaacacagagcgcaagcctggcccactgaccctgctggcacgcaag
atggcatcagagggggctttctctggagttgggtggcatggacgtggggatgcagagagg
caggacaacaatgctgcaactgcaacaatgtcttctggtagaggtcctcaagatggcaca
gtgtctgccatcacccacacaaccaatgctgcagccagtttgcccttccccagactggtt
ccagtaacaaaccagggagttcttggaggccatctcccccacagtgaagttcctgtgagt
gtgcttaggcccactattatggaagagagagatgctgcatggcagcaagaaaacaaggaa
aaggagctgcaggcagagagggaaagagaaaaatcccctgagcaagagcgacttggtgcc
atggagcaggaaagactggagaggcagagaatatttgagcaacaacgtgctgtggagcaa
gagagggaaagagctttggagcgagagaggaaggagagagagaaagctttggcgcgagag
aggaaggagagggagatggctttggagcgagaaaaagctttggagcaagaaaggaaggag
cgggctttggcgcgagagagagcacaagctcttgaacgagaagaggaggaaagagagaaa
gctttggcaaaagagagggaagagcgagagaaagctatgcaattagaaaagcagagagcc
atggaacgagagcgagctttggagcaggagcgcgagagggaggagaaggcagctttggag
cgcgagagggaggagaaggcggctttggagcgcgagagggaggagaaggcggctttggag
cgcgagagggaggagaaggcggctttggagagggaggagaaggcggctttggagagggag
gagaaggcggctttggagagggaggagaaggcggctttggagagggaggagaaggcggct
ttggagagggaggagaaggcggctttggagagggaggagaaggcggctttggagagggag
gagaaggcggctttggagagggaggagaaggcggctttggagagggaggagaaggcggct
ttggagagggaggagaaggcggctttggagagggaggagaaggcggctttggagagggag
cgtatggtgaaggttttggagttagagcggcagaaagctttggaacgggagatgagggag
aaagagagggaggagaaggtgagggctttggagcaagaaagaatcgaaagggagaaagcc
cttgagaaagaaagaaccatggagaaagagagagaggagagggagagagccttagaacag
gagaaggtcctacagagagaaaaagagaaggctttggaacaggagatgagggagaaagag
agggaggagaaggtgagggctttggagcaagaaagaatcgaaagggagaaagcccttgag
aaagaaagaaccatggagaaagagagagaggagagggagagagccttagaacaggagaag
gtcctacagagagaaaaagagaaggccttgcagagagagaaagaggagaaggagagagct
ttggaacaggagaatgtcttgcagagagagaaagaggagagggagagagctttggaacag
gagaaggccttgcagagagagaaagaggagaaggagagagctttggaacaggagaaggcc
ttgcagagagagaaagaggagaaggagagagctttggaacaggagaaggccttgcagata
gagaaagaggagagggagagagcttttgaacaggagaaggccttgcagagagagaaagag
gagagggagagagctttggaacaggagaaggccttgcagagagagaaagaggagaaggag
agagctttggaacaggagaaggccttgcagagagagaaagaggagaaggagagagctttg
gaacaggagaaggccttgcagagagagaaagaggagagggagagagctttggaacaggag
aaggccttgcagagagagaaggagagagctttggaacaggagaaggccttgcagagagag
aaagaggagagggagagagcgttggaacaggagaaggccttgcagagagagaaagaggag
agggagaaagctttggaacaggagaaggccttgcagagagagaaagaggagaaggagaga
gctttggaacaggagaaggccttgcagagagagaaagaggagagggagagagctttggaa
caggagaaggccttgcagagagagaaagaggagagggagagagctttggaacaggagaag
gccttgcagagagagaaggagagagctttggaaaaggagaaggtcttgcagagagagaaa
gaggagagggagagagctttggaacaggagaaggccttgcacagggagagggagagagct
ttggaacaggagaaggcctcgcagagagagagggagagagctttggaacaggagaaggcc
tcgcagagagagagggagagagctttggaacaggagaaggcctcgcagagagagagggag
agagctttggaacaggagaaggcctcgcagagagagaaagagaagagggagagtcatctt
cctccatggaagcgtagtcgtgagtttggtcttacccccctgcctactcctcccctctcc
acaggcgcaggtaagatggcggcaacagaggagggtggggagcccaaagtgccatcccta
ccccaaaaagcattaagagacaaccagccagctgaatctggtacgcccctgtcacaatct
ctagcaatgtctctgtcaccccagtcctccttcaagaagttccgtttcttgagagacccc
atagttctatcccaatcttctgcatccgggatcatcaagaggccccgtacattctctgaa
cgccaccatcctcagtccttagctctccagtcccccagcaaatttggggaaccagagcag
gaaggtactcagcaggggtcccagccttctgctggacaagcagcaccaaagaagcctgca
agacagggggtccttgtttctggagcagacacgtcggggacgacagggccagagagggag
acccgagtgatttccacactgggcaagagtcctgaagaagaaaagggtcagagcctggtg
tcagaggagcatgtccaagcacatagagaggagacagacaaacaggtggtgggagagacg
gccagagaagcaaaagccccctcaggtccagcgggagctgtgctacctccctcaccccaa
ccagtggaaggcaaggtagaaaaaggaagggagaggagtcaaaagaaagaagaaaagctg
ggaagacggtcttcctcgtcgaatgactcctcagattctgggtcgtcgtcctcaggttcg
tctggttcatcgtcatcccagggcaaaacgcacaccactcccagtggtagaaggcctgag
aaacctcagacaaacaccatatcccaggatacggaaacggttagtcaacctgaggatcca
actgaggcaccaaaagccccacagcacaaaaagagagtatctggggaggagaaagaggac
ataaacattgttggagccagacactggaagaaaccattccttggaatacatgctggagaa
gacaatgggcagaaggacagcgagggagaggaggtaaagacagacactacaagggaggtg
aatgaggctgccatggctgagcctaagaaggctcctgagagcagtgaggagtgtgagacc
ccaaagacattcacagcccgtaggatctcccttagcagcagcaaggcctctccaggtgct
gtcagtgcagagggcgaaacagagtctggggccgggaggaagaggcgatggggatccagc
actgcagtcacagccaagaaatcatccatgagcattaccacagactctctgaagtctctg
atcccagacatcagactgtgtccaggccaggagatggtggtggatttgcacccagaggag
gatcacctctctggggtggaggaggagggcagggagcggggtgagcaggacctcaagatc
agacgcacagtcacacaggtggtcccgtcagtgacccaggagaatggacagaaggagtcc
aagaggagtcaacatgaggaggaagaccgagaggatggaggggaggttaaaggagacaga
gaggagaagatggatggctcattccagagagactcattggagacacaatgcccctctccc
accagccatgacatggagatgaaaacagtgacccccagtgacacattgatccgtcgctcc
atcagccagcagaagtctggcgtgtccatcaccatagatgaccctgtccgcacggccaag
cagccctctcctccacgaggcaaattgtccaacatcgtccacgtgtccaacctggttcgt
ccgttcaccctgggccagctgaaggagctgctcggtaggaccggcactgtgctcgaggac
ggtttctggatcgacaagatcaaatctcactgctacgtcacatactccagtgcagaggag
tcaattgccactcgtgcagccctgcatggggtgaaatggcctcagagcaaccccaagttc
ctcagtttggacttcattcagcaggaggagctggatttccagagaggcctgcctccccct
gagagggctggggaggctgagcggggggctgcagcggtgcctggtcggggtgcggccctg
ccccctctcctgcccgaacgggaacagtgggcggagcgagaacgtgagatggagcacagg
gagaggacccgggctgagagggagtgggacagggacaaggtccgggacttaggtccagga
aaacctggagaggaagctgtccccagacgatcccgctccagagagaggaaacgcaaggag
aggaagatggacaagaaagagaaagctgcagacgaacttcctgtcaaactgctggatgaa
ctgttcaataaaaccaaagcagccccttgtatatactggctccccctcacagaagagcag
tttgcacagaaggagacagctcgacaagagcggatgaagaggaggaaggagcagcaagag
gaggtggagaagaaaagggaggaagagcgcaaagaaaggatgaaagccgcgagtgtcgca
tctggagaaagaggcgagggggagcggtacagagagcgagagggagactggggcagagat
ggagagagtggcaaacacagagaagactgctaccgcagacctgggggcagcagtgcaggg
ggggccagacgctcacgcagccgcagtgaccccccacctcgtgacagacgacgctag
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integrated database retrieval system
