Salvelinus fontinalis (brook trout): 129813929
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Entry
129813929 CDS
T11136
Name
(RefSeq) heparanase-like isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00531
Glycosaminoglycan degradation
sfon01100
Metabolic pathways
Module
sfon_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129813929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129813929
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
129813929
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Enzymes
129813929
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Cu2_monooxygen
Motif
Other DBs
NCBI-GeneID:
129813929
NCBI-ProteinID:
XP_055722551
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Position
2:complement(20667295..20682517)
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AA seq
544 aa
AA seq
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MSGILILALVISILSHGYYVGTSVRSARDEVNFESVNLNVDLSRVLKRVNERFLSVAIDA
SLVAEEKFMYLLASPKLRTLAKALSPAFLRFGGTRQDFMTFNPAFLHSNEYHKNSVFDAD
DLCERLELPPILEERLKQEWALHEVLLQKEDLQRKYQSLKFTEYAVDLLYSFTNCSGLDL
IFGLNELLRTTGNSWDSSNARTLIQYCESKQYSMAWELGNEPNSYEKKAGIRVNGYQLGQ
DFIQLRRILRESKLYHDTGLYGPDISQPRDHRRDLLEGFLESGAEAIDACTWHHYYVNGR
HTSLKDFLDPEVLNTLALKTHEVIKTVDLASPGKKVWLGETSSAYGGGAKGLSDTFVAGF
MWLDKLGLGAKLGLDVVIRQVLIGSGTYHLVDDNLDPLPDYWLSVLYKRLVGPEVLSIEA
FSILGKTKRVRVYLHCTNKKSTSYKSGAITLFALNLSKSPASIAVPAMVSNSTVEAFVLQ
SEQPGEEGLYSKSVKLNGEVLKMVDDRTLPSLQGTPLAAGEHLRLPGYSFAFYLLSEAQA
LACR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcatattaatcttggcattagtgatatctattctatctcatggatattatgtc
ggaacaagtgtcaggtctgcgagggatgaggtgaattttgagtctgtaaatctgaatgta
gacctctctcgagtactcaagagagtgaacgaacgttttttgtctgtggccatagatgcg
agtctcgtcgctgaagagaagttcatgtaccttttagcgtctccaaagctgaggacattg
gctaaagctttatccccagcatttctaagatttggagggacaagacaagatttcatgacc
ttcaaccctgcatttttacattcaaatgagtatcacaaaaactctgtttttgatgcagat
gatctctgtgaaaggctggagctgcccccaatactggaggagaggctgaagcaggaatgg
gctctacatgaagtacttctccagaaagaggacttgcagaggaagtaccagagtttaaag
ttcacagagtatgcagtggatctactgtactcttttacaaactgctctggattagacctc
atctttgggctcaatgagctgctcaggaccactggcaactcctgggacagcagcaatgcc
aggaccctcatacagtactgtgaatccaaacagtacagcatggcctgggagctgggcaat
gagcccaacagttatgagaagaaggcagggatccgggtgaacggataccagctgggccaa
gacttcattcaactccgcaggattctgcgggaatccaaactttaccatgacactggactc
tatggaccggacattagccaaccccgagaccaccggagagacttactggaggggttcttg
gaaagtggggcagaagcaattgacgcatgcacctggcaccattactatgtcaacggaaga
cacacatctttaaaagatttcctagaccctgaggtgctaaacactttagccctgaaaaca
catgaagtcatcaagaccgttgatctggcatcccctgggaagaaggtgtggcttggagag
actagttctgcctatggaggcggggctaaggggctgtctgacacatttgtcgctggattc
atgtggctggataaactgggccttggtgcaaagcttggcttagatgttgtaatcaggcag
gttttgattggatctgggacttaccacctggtagatgataacctcgatccacttcctgat
tactggctatcagttctgtacaagaggcttgttggaccagaggtgctgagtatagaagcc
ttttccattttgggaaagacgaaaagagtacgggtctacctacactgcactaacaagaaa
agtacaagctacaaaagtggagcaatcacattgtttgctctgaacctgagtaagagccct
gctagcatcgctgtgcctgccatggtctctaacagcactgtagaggccttcgttcttcag
tctgaacagcctggcgaggagggactctactcgaagtctgtgaaactcaacggagaggtg
ttgaagatggtagatgatcgaactcttccatcgctccagggaactcctcttgctgcagga
gaacatctcagactgcctggttattcctttgccttctatctcctcagtgaggcccaggca
ctggcctgccgatga
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