Salvelinus fontinalis (brook trout): 129813961
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Entry
129813961 CDS
T11136
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129813961
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
129813961
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
129813961
NCBI-ProteinID:
XP_055722610
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All DBs
Position
17:complement(21407157..21473152)
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AA seq
1212 aa
AA seq
DB search
MPNVMDKNEVSPGSSAATMKKKAAGSSGCSHISAPKAATSNCTRSKSSNCVDSAPAAAAS
QSPPNVKQPGEASNAVIDEAEDGEDESKFQYPRLRRTGGSGSGGGGGGGSIRMKNFTPGG
GAAATATRKNSTNNEPILLQTEGAPAATKPTVASKATDTTTCPGDAAGRCETNRAAGAEA
YGAAVAVEVLNAAAGDACNNSTAPISRMKCNKNGECRRDSGTGSLRSIISNKTAGAGRAE
DASLRRGACNSARASMDGSATGSMTQGQGEGSANPGVTPVSTGVPEKKDSRVSFSNAPSR
KASSSLHGSTQTQTTQQPRNSVTFQKPEDGPQIQAEDAEADGSTFMQRQFSAMLQPGVNK
FSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIVIPVGITFFN
DGTTTPWIIFNVISDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKTYLKTWFIVDFVS
SIPVDYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT
YDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSLNKMVNDTWSELYSFA
VFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEDSILEELNEPLREEIVNFNCRK
LVASMPLFANAEPNFVTAMLIMLRFEVFQPRDYIIREGTIGKKMYFIQHGVCNVITKGTL
GMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAI
DRLDRIGKKNSILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVKLVDLQRPRTMSMTS
SVPGGMFSPAGPSGVGALASLQQAVAMSFCPQGMGPMGGMGMPGMGPMGMPMGMGMVPGP
MGPGPMGPGPMGPGSASGSGSGTLQSPRMLRRFQVVHSLSQSPVSASPLQSQPPQMAHAT
GVFGSAISSPPVQSPLAHPGRTFQYMGGAGPSGSQLSLVQHHVPSPTHTIQRPSSHKSTH
SLHSGTLSQDARVLSASQLSLPQDGTPPAGPSPPQSTHPSTHASSTSIGPPQPTHPSQPG
PSGVGVQVGGRPAGVPQRVAFASTPPPGGAPGMGAAAAAAGSGLPASGAPKKDSIVSIPE
LDSARNRLSSNL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgtcatggacaagaatgaggtttcaccaggctcgtctgctgcgaccatgaaa
aagaaggcggcaggcagtagcggatgtagccacatcagcgcgcccaaagctgccacgtcc
aattgtacgagaagcaaaagcagcaattgtgttgactctgcccccgctgctgctgccagc
cagagccccccgaatgtgaagcagcccggcgaggccagtaacgctgtcatagacgaggcg
gaggacggtgaggacgagtccaagtttcagtatccgcgactgcgccgaaccggggggagc
ggcagtggcggtggtggtggaggcggtagtatcaggatgaagaactttacgccaggaggg
ggagccgcggccacggctaccagaaagaactccaccaacaacgagcccatcctactgcaa
acagagggtgcgcctgctgctactaagcccactgtagcatccaaagcgactgataccacg
acctgtccgggagatgctgccgggcgctgcgagaccaacagagcggcaggggcggaggcg
tatggagcagcggtcgcagtagaggttttaaacgcggcagcaggtgatgcttgtaacaac
agcaccgctccaatttcaagaatgaaatgcaacaaaaacggagaatgcaggagggactcc
ggcaccgggagcctgcgctcgatcatctccaacaagactgccggggcggggagggccgag
gacgcgtcccttaggcgtggtgcctgtaactcagccagggccagcatggatggctccgcg
acaggctccatgacgcagggccagggggaaggtagcgcaaaccccggcgtcacccctgtt
tccaccggcgtccccgagaaaaaggactccagggtgtccttctccaacgcgccaagcagg
aaagcctcctcatcgctgcacggctcgacccagacccagacgacccagcagcctagaaac
tctgtcaccttccagaagccggaggatggaccccagatccaggccgaggatgccgaggct
gacggaagcaccttcatgcaacgacaattcagtgccatgctgcagcctggagttaacaaa
ttctccttacgcatgtatgggagtcaaaaggcggtggagagggagcaagagcgggttaaa
tcagcgggcaattggattatccacccctacagtgatttcaggttctactgggatttcacg
atgcttctcttcatggtgggtaacctgattgtcatcccggtgggcatcaccttcttcaac
gatgggacgaccaccccctggatcatcttcaacgtcatctccgacaccttcttcctcatg
gacctggtcctcaacttccgcactggcatcatcatcgaggacaactctgacatcatcctg
gaccccaagaccatcaagaagacgtacctgaagacctggttcatcgtggactttgtctcc
tccatccccgtggattatatctttctgattgtggagaaggggatcgactctgagatgtat
aagacggccagggccctgaggatcgtacgcttcactaagatcctgagtctgctgaggctg
ctgaggctgtcccggctcatccgctacatccaccagtgggaagagatcttccatatgacc
tatgacctggccagtgcagtaatgcggatcttcaacctgattggtatgatgctgctgctg
tgtcactgggatggctgtctgcaattcctggttcccatgctgcaggacttcccccaggac
tgctgggtctccctcaacaagatggtgaatgacacatggtctgagctgtattcatttgca
gtgttcaaggcgatgagccacatgttgtgtatcggctatggtcggcaggccccggagagc
ctgtctgatatctggctcaccatgctcagcatgatcgtaggggccacctgctacgctgtg
ttcataggccatgccaccgcactcatccagtccctggactcgtcccgacgacagtaccag
gagaagtacaaacaagtggagcagtacatgtctttccacaagctgccatccgacttccga
cagaaaatccatgactattatgagcaccggtaccaggggaagatgtttgatgaagacagc
atcctggaggaactgaacgaaccactcagagaggaaattgtcaatttcaactgccgtaag
ctggtggcgtccatgccgctgttcgccaacgcagagcccaactttgtgacagccatgttg
atcatgctccgcttcgaggtcttccagcctcgtgattacatcatcagagagggcaccatc
ggcaagaagatgtactttatccagcacggagtctgtaacgtcatcaccaagggaaccctg
ggaatgaaactctctgatggctcttactttggagagatctgtttgctgacgcggggtcgg
cgtacggccagcgtcagagcggagacgtactgccgtctctactccctgtctgtggacaac
tttaatgaggtgctagaggagtaccccatgatgagacgggcctttgagaccgtggccatc
gaccgactggaccgcataggcaagaagaactccattctgatgcacaaagtgcagcacgac
ctcaactccggcgtcttcaacaaccatgagaatgagatgatccaggagattgttaagtac
gaccgtgagatggtcaaactggtggacctccagagaccccgcaccatgtccatgacatcc
tccgtccctgggggcatgttctcccccgcaggcccatccggggtcggggccctcgccagc
ctccagcaggctgtggccatgagcttctgcccccaggggatggggccgatggggggaatg
gggatgccggggatggggccgatgggtatgccgatggggatggggatggtgccaggtccg
atggggccaggtccgatggggccaggtccgatggggccagggtcagcgtctgggtcaggg
tcagggacgctgcagtccccccgcatgttgcggaggttccaggtggtccatagcctgtca
cagagccctgtttccgcatctcctctccagtcccagccaccacagatggctcatgcaaca
ggagtgtttgggtcggctatttccagcccaccagttcagagccctctggcgcatccagga
cggacattccagtacatggggggagcggggccgtctgggtctcagctgtccctggtgcag
caccacgttcccagccccacgcacaccatccagaggccctcctcacacaaaagcacccac
tcgctccactcaggcaccctgagccaagacgcccgtgtcctctccgcctcccagctctcc
ctccctcaggatggaacccctcctgccggccccagccctccccaatctacccacccatcc
acccacgcctcctccacctccatcggcccccctcagcccactcaccccagccagcctggg
ccctctggggtgggggtccaggttggggggagacccgcgggagttccacagcgggtggcc
ttcgcctccactcctcccccaggaggagcacccgggatgggggcggctgcagcggcggct
gggtcggggctcccggcctctggagctcctaagaaggattcgatcgttagcataccagag
ttagactcagcccggaaccggctgtcttccaacttgtga
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