Salvelinus fontinalis (brook trout): 129813963
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Entry
129813963 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129813963
04121 Ubiquitin system [BR:
sfon04121
]
129813963
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129813963
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129813963
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129813963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-Nse
HypA
C1_2
Zn_ribbon_6
DZR
Motif
Other DBs
NCBI-GeneID:
129813963
NCBI-ProteinID:
XP_055722613
LinkDB
All DBs
Position
17:complement(21478016..21482399)
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AA seq
333 aa
AA seq
DB search
MHFVGCRYPYTFPPGCLVENPKMAEAPPRPCRFFCHRCSAEINPRLPEYTCPRCESGFIE
ELSVERSTENGSTSTASTSDQNRPTFESMDHQHMFTFPPGYGQFALGIFDENFDLRAGLP
AEDNRETENRREREMASRQRYSARQPQGRHMPRRPGQRHEGVPTLEGIIQQLVNGIIAPT
AMPNIAMGPWGMLHSNPMDYAWGANGLDSIITQLLNQFENTGPPPADRERIKNLPSIQIT
EEHVGSSLECSVCKEDYSVGETVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTA
TDPPGLSGMNFSPSSSSSSSSSSPSNENAANNS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgtcggttgtcgctacccgtacacgttccctccgggttgtctggtagagaat
ccgaagatggctgaagctcccccacggccctgccggtttttttgtcaccgatgttcagca
gagatcaaccctcgtctcccggagtacacatgtccgcggtgtgaatctggcttcattgaa
gagctatcagtggagagaagcactgaaaatgggtccacatccactgcctccaccagcgat
cagaaccgtccgacttttgagagtatggaccaccagcacatgtttacatttccgcccgga
tacggccagttcgctctggggatttttgacgagaacttcgacctccgagcggggctgcca
gcagaagacaaccgcgagacggagaaccggcgggaacgggagatggcgtcacggcaacgg
tacagcgctcggcaaccacagggacgacacatgccacggcgaccgggacagagacacgaa
ggagtgcccacattagagggaatcatccagcagctagtgaatggaatcatagcacccaca
gccatgccgaacattgcaatgggaccatggggcatgctacactcaaatccaatggactat
gcttggggtgccaatggacttgattctatcattacccagttattaaatcagtttgagaac
actggtcctcctcctgctgacagagagaggataaagaacctgcccagcatccagatcaca
gaggaacatgtgggttccagtttagaatgttctgtgtgcaaggaagactacagtgtaggg
gagactgtgaggcaacttccgtgcaatcacctgtttcacaatgactgtatagtaccatgg
ctggaacagcacgacacatgtccagtgtgcagaaagagcctcagtggacagaacacagcc
acggacccccctggactttcaggaatgaacttctccccttcctcctcttcctcatcctct
tccagctcccccagtaacgagaacgctgccaacaactcctag
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