Salvelinus fontinalis (brook trout): 129814060
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Entry
129814060 CDS
T11136
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04136
Autophagy - other
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129814060
04136 Autophagy - other
129814060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129814060
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129814060
Membrane trafficking [BR:
sfon04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
129814060
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129814060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
Beta-prop_IFT140_1st
Beta-prop_EML
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_RSE1_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
129814060
NCBI-ProteinID:
XP_055723239
LinkDB
All DBs
Position
1:complement(77585188..77602540)
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AA seq
463 aa
AA seq
DB search
MEERETSDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRAVCSAMAIAS
SVDLLGRYVSISSLSFSSDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFT
AASTYLPSQVSDMMHQDRAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNID
PQDGGECVLVRKHRLFERDEAPQEAQPEKEESEDGRSLPPSTSPSYAATVSLPSTPPSST
TLTGYSEDGGAEKGDVIPEHEFAEGPVCLDDENEFPPVSKQTN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggagacatccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacctctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtg
tacattcacaacatcaaagacatgaagctgctgaagacgctgctcaacacgccccacaac
ccctcgggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcagaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcttcaggaacaaaactg
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagagggcagtgtgcagtgcgatggcgattgcatcc
tctgtggatctattggggcggtatgtgagtatcagctcgttgtcctttagttcagacgca
cagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactggaacagcac
agccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaagatgttcaca
gcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagaccgggccttt
gccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtccacggttcag
aagctacctcgtctgctggtggcatcatcagatggacatctctacatctataacattgac
ccacaggatggaggagagtgtgttctggtcaggaaacacaggctatttgaaagagatgag
gcgccacaggaagcacaaccggaaaaggaggagtcagaggatggaaggtccctcccaccg
tcaaccagcccatcatacgctgccactgtgtccctcccctcgaccccaccttcttctacc
actctcacaggctactcagaggatggaggggctgagaaaggggatgtgatccctgaacat
gagtttgccgagggacccgtctgtctggatgacgagaacgagtttcctcccgtcagcaaa
cagaccaactga
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