Salvelinus fontinalis (brook trout): 129814081
Help
Entry
129814081 CDS
T11136
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00250
Alanine, aspartate and glutamate metabolism
sfon00410
beta-Alanine metabolism
sfon00430
Taurine and hypotaurine metabolism
sfon00650
Butanoate metabolism
sfon01100
Metabolic pathways
Module
sfon_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
129814081
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
129814081
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
129814081
00430 Taurine and hypotaurine metabolism
129814081
Enzymes [BR:
sfon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
129814081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
SHMT
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
129814081
NCBI-ProteinID:
XP_055722839
LinkDB
All DBs
Position
17:27240374..27248808
Genome browser
AA seq
582 aa
AA seq
DB search
MEGQQWNSEILDKLHSQNSIICGHIMDYLQLPESIIENAKPDGQVLAESKQHRSSSDINP
PQTASDNTCSITKDFSCIYSKDLLPALSGEDTTKCFFQELVNILLSYVCKSFRQSSKVLD
FHHPHQLREGLEGFSLELPDQPENLEQLLVDCRDTLKYGVKTGHPRFFNQLSSGLDVIGL
AGEWLTSTANTNMFTYEVSPVFILMEDVLLRKMQEIVGWSKEEGDGVFCPGGTMSNLYSV
LLARYHFFPEVKTKGMTALPRLILFTSAHSHYSVKKSAAVLGIGSENVVLVKCNDRGKMI
PAELESSIITAKDQGCVPFYVNATAGTTVYGAFDPLNAIADICESHGLWLHVDAAWGGGL
LMSNLHRVKLQGIERAWSVTWNPHKMMGAPLQCSAILVKKRGLLKDCNQMCAEYLFQTDK
HYDTSYDTGDKTIQCGRHVDVFKLWLMWKAKGSEGFESQVNKCLENAEHLFDKLKQRPDF
ELVFKSKPEHSNVCFWYIPPSLRNMPPGSERNRRLHEVAPKIKAKMMEQGMAMIGYQPLG
DKVNFFRCVFSNPATQTEDVDYLLEEITRLGHDICIRIETDL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcagcagtggaacagtgagatactggacaaacttcactcccagaactcaatc
atatgtggacacattatggattatttgcagctgccagaaagcataattgaaaatgctaaa
ccagatgggcaggttttggcagagagtaaacagcacagaagctcatctgacatcaaccct
ccacagacagcaagtgacaacacctgcagcataaccaaggacttcagttgcatctacagc
aaagatctactccctgctctcagtggtgaggacacaaccaaatgtttcttccaagagctg
gtgaacattctcctcagctatgtctgcaagtcgttcagacagagctccaaagtcctggac
ttccaccaccctcaccaactcagagagggcctggagggcttcagtctggagctcccagac
cagcccgagaacctggaacaactcctggttgactgcagggacaccttgaagtatggagtc
aaaacaggtcacccacgcttcttcaatcagctgtcatcagggctggatgtcatcggtctg
gccggggaatggctgacgtctactgccaacacaaacatgtttacttatgaagtgtcccca
gtcttcattctgatggaggacgttctcctgagaaagatgcaggagattgtgggttggtca
aaggaagagggggatggtgttttctgtccaggtgggaccatgtccaatctgtacagtgta
ctgctggccagataccacttcttccctgaagtgaagaccaaagggatgactgctctgccc
aggctaatcctcttcacatcggcacatagtcattattcagtcaagaaatctgcagcagtt
cttgggataggaagtgaaaatgttgtgctggtgaaatgtaatgaccggggaaagatgatc
cctgcagaattggagtcaagtatcattactgccaaagatcagggttgtgtcccattctac
gtcaatgccacagcaggcaccactgtgtacggagcctttgatcctctcaatgccatcgca
gacatctgtgagagccatggactatggctgcatgttgatgcagcctggggcggaggactg
ttgatgtccaacctgcaccgtgtgaaactacaagggattgaacgagcctggtctgtgact
tggaaccctcataaaatgatgggtgctccgctgcaatgctcagccatactggtgaagaaa
aggggcctcttgaaagactgcaatcagatgtgtgctgaataccttttccaaactgacaag
cactacgacacctcttatgacaccggagacaagaccattcagtgtggcaggcacgttgat
gtcttcaagctctggctcatgtggaaggccaagggttcagaaggctttgaatcacaggtc
aataaatgtttggaaaatgctgagcacttgttcgacaaactcaaacaaagaccagacttt
gaactcgtcttcaaaagcaaacctgaacacagcaacgtgtgcttctggtacatcccacca
agtctgaggaacatgccaccaggttctgagaggaacaggagactccatgaggtggcacca
aagatcaaagccaagatgatggagcaggggatggccatgattggttatcagccgcttgga
gacaaagtgaatttcttccgatgtgtcttctccaacccggcaacacagacagaggatgtg
gactacctcttggaggagatcactcgtcttggtcatgacatatgcatcaggattgaaacc
gatttatga
DBGET
integrated database retrieval system