Salvelinus fontinalis (brook trout): 129814116
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Entry
129814116 CDS
T11136
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129814116
04518 Integrin signaling
129814116
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129814116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129814116
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129814116
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
Fn3_PBP1
FN3_DSCAM-DSCAML_C
EGF_2
Pur_ac_phosph_N
EGF_Tenascin
Fn3_VIN3
Interfer-bind
DUF7949
EGF_PEAR1L
hEGF
Motif
Other DBs
NCBI-GeneID:
129814116
NCBI-ProteinID:
XP_055722899
LinkDB
All DBs
Position
17:28680843..28716701
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AA seq
1047 aa
AA seq
DB search
MSKVAYQFHQLLHLFSPLAMTTRLHWLTRALCLISILCTVTSTYVTEDYSSPAEKEVTFS
HVYKIDLAKSPECKLALQTPPSQQDQFSGLQELEGGATLEGENNIVFRHQINLKTPKCDC
DESESFTSLLYRVNGLEEEVEHLKSQCSQGCCGGAGGVDTSCSGHGTYQHNTCSCQCNPS
WEGPDCSISTCPDECNDNGRCVDGKCVCHAGYTGSDCSQLMCPGACNDKGHCVDGKCVCF
SHFTGEDCSEQKCDPDCIHGTCVNGMCICDEGFFGEDCSTVLGPNGLRLVRVTDNSLLVE
WEAVKAAEYYILTWHPEGNEAELERVTVPNTETSYLITGLSPGVTYIVQVYAVIKEIQSE
GNRIEATTEVSGIDGIRVLGQTEDSIQVDWQNPASPLDHFRLTYANPDGQEEEQNVPMSA
EARTTQTIVGLQPGTEYLIRVQGIKGTIEGKAAFATGVTDLDGPTNLLTKEVTEDTATVE
WQKVQAEIDGYMISYSSAEGSSGEIPVGADSTSYRLTGLRPGVLYTVYIWAVKGSRVSRK
SSTEAETELDFPTNLLTREVTEDTVTVTWDKVQAEIDGYMISYSSAEGSSGEIPVGADST
SYRLTGLRPGVLYTVYIWAVKGSRVSRKSFVDAETDLDAPTNLFTREVTEDTADVWWDRP
LADIDGYLISYSSAEGSSGEIPVGADSTSYRLTGLRPGVLYTVYIWAVKGSRVSRKSSTP
AETEIDAPKNLKASDVKLNVATLTWTAPLARIDGYILTLRAEDGSLKAVEKNLMAGESSF
AMSGLEKGKNYIVTLLAYRGPKRSRVIEITFKTVGVLYPFPMDCTQIKKNGNVASGIYTV
YVNSERTKPMEVYCDMDTDGGGWVVFQRRNNGQMDFMKRWRQYMAGFGNMTDEFWLGLDN
IYELTNTPTQYELRVDLGVGSEKAYAVYDNFKIAPAKQKFKLTIGEYSGTAGDAMNYHQG
RPFSTVDNDNDIALGNCALTHRGAWWYKNCHLANLNGKFGDNRHSMGVNWEPWKGHLMSL
DFTEMKIRPVGTTRKRRSLSSRTAPRK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagttgcatatcaatttcaccaattattgcacttattttcccctctagccatg
accactagacttcactggctcacaagagctctatgcctgataagcatactgtgcactgtc
acttccacatatgtgacagaagattattcatcccccgctgagaaagaagtcaccttcagc
cacgtctataagattgacctggccaagagccctgagtgtaaactcgccttgcagaccccc
ccttcccaacaggaccagttttcaggcctgcaagagctggaagggggcgctactctggag
ggggaaaacaacatagttttcaggcaccaaatcaacctcaagaccccaaagtgtgactgt
gatgagtcggagagctttacgtctctgctgtacagagtcaacgggctggaggaggaggtg
gaacacctgaagagtcagtgctcccagggctgctgtggtggagcaggaggtgtggacact
agctgtagtggccacgggacctaccagcacaacacctgcagttgtcaatgcaaccctagc
tgggagggtccagactgctccatttccacctgtcctgatgagtgcaacgacaacggccgc
tgtgtggatggcaagtgtgtctgccacgctggctacacggggagtgactgcagccagctg
atgtgcccaggggcctgcaacgataagggacactgcgtggacggcaagtgtgtttgcttc
agccacttcactggcgaggactgcagcgaacagaaatgcgatcctgactgcatccacggc
acctgcgtgaacggaatgtgtatctgtgacgaaggcttctttggtgaagactgctctaca
gtgttgggccctaacggcctgcgtctggtaagggtgactgataattctctgctggtggaa
tgggaggctgtgaaagcagcagagtactacatcctgacctggcaccctgagggcaatgag
gcagagctggagcgggtcaccgtgcccaacacagagacctcctacctgatcacaggactc
agcccaggtgtcacctacatagtgcaggtgtacgctgtcatcaaggagatccagagcgag
gggaacaggatagaggcgactacagaggtgtctggtattgatggtatccgggtattgggc
cagactgaggactctatccaggtggactggcagaaccctgcatcacctctagaccacttc
agactgacctatgctaaccctgacgggcaggaggaggagcagaacgtaccaatgagtgca
gaggccaggaccacccaaaccatcgtaggactgcaacctggcactgagtacctcatcaga
gtgcaaggcatcaaagggaccatcgaagggaaagccgccttcgccaccggggtcacagat
cttgacggtcctactaacctcttgaccaaagaagtgacagaggataccgctaccgtggaa
tggcagaaggtacaagcagagatcgacggctacatgatcagctacagctctgctgagggc
tccagcggggagatccctgttggggcagacagcacctcctacaggctgactgggctgagg
cctggagtcctctacacagtctacatttgggctgtcaagggctcccgggtcagcaggaag
agctccacagaagctgagacagaactagattttcctactaacctgttgaccagagaagtg
acagaagacacagtgacagtaacatgggataaagtccaggctgaaattgacggctacatg
atcagctacagctctgctgagggctccagtggggagatccctgttggggcagacagcacc
tcctacaggctgactgggctgaggcctggagtcctctacacagtctacatttgggctgtc
aagggctcccgggtcagcaggaagagcttcgttgacgctgagacagatctggatgctcct
actaacctctttaccagagaagtgacagaggacacagctgatgtgtggtgggacagacct
ttagcggacattgatggctacctgatcagctacagctctgctgagggctccagtggggag
atccctgttggggcagacagcacctcctacaggctgactgggctgaggcctggagtcctc
tacacagtctacatctgggctgtcaagggctcccgggtcagcaggaagagctccacacca
gctgagacagaaattgacgcaccaaaaaacttgaaagcatcggatgttaaactgaatgta
gctaccctgacctggactgctcccttagccagaattgatggctacatcctcacattgaga
gctgaggatggcagtttgaaggctgtggagaagaatctgatggcaggagagagcagcttt
gccatgtcgggcctggagaaaggaaagaactacattgttaccctccttgcttacagagga
ccaaagaggagcagagtgatagagatcacattcaaaacagtgggtgtgttgtacccattc
cccatggactgtactcagattaagaagaatggtaacgtagcaagtggaatctacaccgtt
tacgtcaacagtgaacgtaccaagcccatggaggtgtactgtgacatggacactgatggc
ggtggatgggtggtgttccagagacgcaacaatggacagatggacttcatgaagcgctgg
agacagtacatggctggttttgggaacatgactgatgaattttggcttggtctggacaat
atctatgagctgaccaatactcccacgcagtacgagctgcgagtggaccttggtgtgggt
tcagagaaggcctatgctgtctatgacaacttcaagatagccccggctaagcagaagttc
aagctgaccatcggtgaatacagtggaacagcaggcgatgccatgaactaccatcaaggt
cgccccttctccactgttgacaatgacaatgacattgctcttggtaactgtgccctgaca
catcgtggtgcatggtggtacaaaaactgtcaccttgccaacctcaacggcaaatttgga
gacaacagacacagcatgggtgtgaactgggagccatggaagggtcacctgatgtctctt
gatttcactgagatgaagattcggcctgttggcactaccaggaagaggaggtcgcttagc
agcagaacagctcccagaaaatag
DBGET
integrated database retrieval system