Salvelinus fontinalis (brook trout): 129814146
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Entry
129814146 CDS
T11136
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129814146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129814146
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
129814146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
129814146
NCBI-ProteinID:
XP_055722952
LinkDB
All DBs
Position
2:21368139..21436210
Genome browser
AA seq
2680 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQ
YKMSQNSMHGSPASTNYQQTTISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAA
YMQQYPHPPSYSQHQQIQQGSPQRPVQPCLEVQTQPQASPHQNPSTPTLVASPMVPGGMR
NIHDNKVSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVCSP
AGSEGTPKAGLRPSLILHSPHPYASPRDSAPDLLLDSPDCKKKQKKLTKEEKEQLEKAAM
YDIVSSPSKDSTKLTLKLSRVKSTEMDQSGELLPGAEDQDTDLAYNSLQFSRTQQDPAHR
LGPGQGEQSGYQQVPVLQNTKQAGGVISGAVYDDAEMDALAEIERIERETLIERERCSKE
VQDKDKPLKKRKQDSYPQEPGAGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALM
VSIDLQQAGRADGQPEVNIGTHTPALRSWPEERLCPGDGPDSTGVLRLNAKTEGDTLQTA
DVRPEVIKQRADTPKKLGPDVRPETPKHKHENRRDSSKHRHDGKPDNSKARPDARMPDKP
RQRHEGRSDSGHREDRSRDSDPSRIRRPETPSKSSRGEHDSKHGRDKDRERGDKERERKH
RTEAGDPRDRRSPEQRSRPESPRVKQEGRGGVDHSGRQRTDRPGPNLKSPNKEERRSGEE
RRSGDGSRNRQDSKQQPAENKQEFPAYLLGGVKSGGFKNFVIPKVKRDKDGHVLAAEIRK
PGLGSVVEGWKEPRVKLERLGLVEKMKTAAKPVVVLQKLSIDEVQKIIRERKDRSARSSK
SSKSRPSHWISEKESTMPLCERVKMNKRKRSTIKEKPKYAEVNSDDDDDDDDSVTESTRK
RHKKEREKTWEPDERERRGSGRRGSSSRHRERSPEDSYDESPPPSMSDLARKMKKEKQKK
RKAYEPKLTAEELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSEL
ASESAKIKAMGITFRISSGKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLIM
ERVTKSADACLTALNIMTSARMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPH
GGGLLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITP
FFVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKD
GEPMYIQMVTALVLQLIQCVVHLPNNRDSHDEYDKKVDQDVLITNSYETAMRAAQNFLSV
FLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMA
LRVASLDYLGTVAARLRKDGVTSKMDQRSIDRILRETQGNDETQQLQKALLDYMDENAET
DPSLVFARKFYIAQWFRDTLTEMEKAMKSQNQRGDEDSSEGQHHAKDIETTGEIMQRAEA
RKKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLG
ESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSR
PQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGI
KKLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEEDA
AYKPARKACVQLVDNLVEHILKYEESLTDIENKGVNSNRLVSCITTLFLFSKIRSQLMVK
HAMTIQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYGM
TVVQHCVSCLGAVVNRVTRNYKFVWACFNRYYGALTKLKTQHSEDSNNPVLAANKPALLR
SLFTVGALCRHFDFDEEEFKGPTKVVIKEKVMELLLYFTKHEDEEVQTKAIIGLGFQFIQ
YPGLMFMQDVMSLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQE
DLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSTVRHFALNVIALTLNQGLIHPVQCVPY
LIAMGTDPEPTMRNKADQQLVEIDKKYSGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRGY
RQDETTSALCAHLFSMVRSNRQHRRAFLISLLNLFDDSSKIEVNMLLYMADNLACFPYQI
QEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRQREKKSKERKYQSEEENSSSSSSSE
EEHNRHSISSNSSDEDNEVVHRPKKPKHRAQAPVKSDSDSDLEMEDLDKVMQRLPDNPIP
LLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKGHVHFSPHQ
TLDFLTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITS
LLGGPSHQDHKNHHQDHKNHHQAPIETDDDESDGDEKAPVSSRRSRKHGDSAEASGHMNE
TLAARDVIALCCPKYKDRPQIARIIQKTNTGYRVQWMAGSYSGVWGEAKKRDGRKTVPWV
DTIKESDIIYKKIALTSAHKLTNRVVQTLRSLYSAKEGTS
NT seq
8043 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttact
gacttgttaaaccagctgcccctgccatcccctctccccgcaaccaccactaagagtctg
ctgttcaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccacagagcacatagagctgaag
gataacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctg
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaaacc
actatctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccagg
ttcacgccccagcagaacagccctgtgcccagcccctatgctccccaaagccctgctgct
tacatgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaagga
agcccccagaggcctgtgcagccctgcctagaggtgcagacgcagccgcaggcctccccc
caccagaacccctccaccccaaccttagttgccagccccatggttcctggcggcatgcgg
aacatccacgacaacaaggtctccgggcaaatttcaagcaactcagccaatcacaatgcc
agacatggctccaacgaagactacatgaacatagtccacagactagggaatgaggagagt
gatccttccatgagaaatgcctccttcccactccgttcgccccagtctgtttgttcccct
gctggcagcgaagggaccccaaaagcagggttacgacctagcctcatccttcactcccca
cacccttacgcttccccccgtgacagcgctcccgacctcctcctggactctcctgactgc
aagaagaagcagaagaagctaactaaagaggagaaggagcagttggaaaaagctgctatg
tacgatatcgtcagctctccctctaaagactctaccaagctgaccctcaaactgtcccgg
gtgaagtccactgagatggaccagtccggagagctcctacctggggcagaggaccaggac
actgacctggcctacaacagcctgcagttttcccggacgcagcaggaccctgcccacagg
ttagggccaggccagggggagcagtcaggctaccaacaggtccctgtgctccagaacact
aagcaggctggaggggtgatcagtggagctgtttacgacgatgctgagatggacgcgctt
gctgagatcgagaggatagaacgggagacgctcatagaaagggagcgctgctccaaagag
gttcaggataaagacaagccactgaagaagcggaagcaggactcgtatccccaagagcct
ggagctggaggtacagcgggggcaactcaacctggcgtgggagggggaaatgctggcagc
aagctggcaccccaggaggctagtgctgccagtaatggtgcgagccggcctgccttaatg
gtcagcatcgacctgcagcaagcaggtagagctgacgggcagccagaggtaaacataggc
acccacacccctgccctgaggagctggcctgaggaacgcctgtgtcctggggacggcccc
gactccactggagtcctgcggctaaacgccaagacagaaggagacacactacagactgca
gacgtccggccagaggtcatcaagcagcgtgccgacacccccaagaagctgggccccgac
gtccgaccggagacccccaaacacaagcacgaaaacagacgagactcttccaaacatcga
cacgatggcaaacctgacaatagcaaggcccgccctgatgccaggatgcctgacaagcca
cgacaacggcacgagggtcgctcagactctggtcacagggaggacaggtcccgggacagt
gacccatcccgcatccgcaggccagagacccccagcaagtccagcaggggggaacatgac
tccaaacatggacgggacaaagacagggagcggggggataaggagagggagaggaaacac
aggacagaggcaggggatccacgggaccgacgatctccagagcagcgctccaggccagag
agcccgcgggttaagcaggaaggccgagggggggtggaccacagtgggcgccagaggact
gaccggccaggccccaacctcaaatcccccaataaagaggagaggaggagcggggaggag
aggaggagtggggacggcagcaggaaccgacaggactctaagcagcaacctgctgaaaac
aagcaggagttccctgcttacctgctggggggcgtaaagtctggaggctttaagaacttt
gtgattcccaaagtgaagcgggataaggatgggcatgtgttggcagctgagataaggaag
cctggtctgggttcagtagtggagggctggaaggagccccgggtcaagctggagcgactg
gggctggtagagaagatgaagacagcagccaaaccggttgtggtgctgcagaaactcagt
atcgacgaggtgcagaaaatcatcagggagaggaaagatagaagcgcacgcagctccaag
tcctccaagagcagaccctctcattggatttctgagaaagagtccaccatgccactgtgt
gagagggtgaagatgaacaagcgcaagcgcagcaccatcaaggagaagcccaagtacgcc
gaggtcaactcagatgatgacgatgacgacgacgactctgtgacggagtctacgcggaag
cgtcacaagaaggagcgggaaaagacatgggagcccgatgagcgagagaggagaggctca
gggcgcagggggtccagcagccgccaccgtgaacgcagcccagaggattcatacgatgag
tccccaccacccagcatgagtgaccttgccagaaagatgaagaaggagaaacagaagaaa
agaaaggcatatgagcccaagctgacagcagaagaactgatggactcctccacgttcaag
aggttctcagccagtgtggacaacattctggagagcttggaggacattgacttcaatgct
atggatgacgatgagatcccacaggagcttctgctggggaaacaccagctgagtgaactg
gccagcgaatctgctaagatcaaggccatgggcatcaccttcaggatttcatctggtaag
ttggtgaaggtcctgaacatcctggagaaaaacattcaggacgggtccaaactctccaca
ctgatgaaccatgacgccgacgcagaagacgaggagcggctgtggcgtgacctcatcatg
gagcgcgtgacgaagtcagctgacgcctgtctgactgccctcaacatcatgacgtcggcc
cgcatgcccaaggcggtgtacatcgaggacgtgattgagagggtgctgcagtacaccaag
tttcacctgcaaaacaccctctaccctcagtatgaccctgtctacagagtggaccctcac
ggaggtggcttgctgagctccagggctaagagagctaaaagctccacacacaagcagagg
gtgatcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatctctgagctcctg
gagatacagctgttgactgacaccaccatcctgcaggtctcctccatgggcatcactcca
ttctttgtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgactgcggtg
ttctctcgctatgaaaaacacaggcaactcatcctggaagagatcttcacctctctggcc
agactacccaccagcaaacgcagcctcaggaatttcaggctgaacagcagtgataaggat
ggggagcccatgtacatccagatggtcacagctctggtgcttcagcttatccaatgtgtg
gtgcacctcccgaacaacagggacagccacgacgagtatgataagaaggtggaccaagat
gtcctgatcacgaactcttatgagacggcaatgcgagcagctcagaacttcctgtccgtc
ttcctaaagaagtgtggcagtaagcagggagaggaggactatcgcccactgtttgaaaac
tttgtccaggacctgctgtctacggtgaacaaaccagagtggccagctgctgagcttctc
ctcagtctgctgggtcgtctactggtgcatcagtttagcaataagcagacagagatggct
ctgagggtggcatcgctagactacctgggcaccgtcgctgcccgcctgcgcaaagacggc
gtcaccagcaagatggaccagcgctccatcgaccgcatcctcagagagacacaaggcaat
gatgagacccagcagctgcagaaggccctgttggactacatggatgagaacgcagagacg
gatccatctctagtttttgccaggaagttctacatcgcccagtggttcagggacactttg
acagagatggagaaggccatgaagtctcagaaccagcgaggggacgaggactcttctgaa
ggccagcaccacgccaaggacatcgagaccaccggagagatcatgcagagagccgaggca
cgcaagaagtacctccgcaacattatcaagaccgcgccctcgcagttcagcacactgagg
atgaactctgacactgtggactatgatgactcatgcctgattgtcagatatttggcctct
atgaggccattcgctcagagcttcgatatttatttaacacagatcctgagagtgctgggg
gagagtgccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggctgta
gaccccagtattctggccaggttggacatgcagcgcggggtccatggtcgtctcatggac
aactccaccagtgtacgcgaggctgctgtggagctgctggggcgttttgtgttgagcaga
ccccagctcacagagcagtactacgacatgctgatcgagaggatactggatacgggtatc
agtgtgagaaagagggtgattaagatccttagagacatctgtctggagcaacccaccttc
aacaagatcactgagatgtgtgtcaagatgatccgcagggtcaacgacgaggagggcatc
aagaaacttgtgaacgagaccttccagaaactctggttcacccctacacccaatcacgat
aaagacgccatgacccgcaagatcctcaacatcacagacgtggtgtctgcatgcaaagat
acaggctatgactggtttgagcagctgcttcaaaacctgctgaagaccgaggaagatgct
gcctataagccagccagaaaggcctgcgttcagctggtagacaatctagtggaacacatt
ctaaaatatgaagagtctctcactgacattgagaacaagggggtgaattccaaccgtctg
gtgtcctgcatcaccaccctctttctgttcagtaaaatccgatcccagctgatggtcaaa
catgccatgaccatccagccttatctcaccaccaagtgcaacacccagagtgacttcatg
gtgatctgtaacgtggccaagattcttgagctggtgatccctctgatggagcacccctct
gagaccttcctcaccaccatagaggaagacctgatgaagctcatcatcaaatacggcatg
acggttgtacaacactgtgtgagctgtcttggagctgtggtgaacagggtcactcgcaac
tacaagtttgtttgggcttgtttcaaccgttactatggtgccctgaccaagctgaagacc
cagcactccgaggactccaacaaccctgttctggctgctaacaaaccggccttgctgcgc
tcgctgttcactgtgggggcactctgtcgccactttgactttgacgaggaggaattcaag
ggccccacaaaggttgtgataaaggaaaaagtgatggagcttttgctgtacttcactaag
catgaagatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatccag
tacccagggctgatgttcatgcaggatgtgatgagtctgtacaatggcatcctgtcagac
aggaagagctctgtcaacctaaagatccaggtgctgaagaacctgcagacatacctgcag
gaggaagactcgcgcatgcaggaggccgaccaacagtggaagaagctgtcgaagcaggag
gacctgaaggagatgggtgacatctcgtcaggtatgagcagctccatcatgcagctgtac
ctgaagcaggtgctggaggccttcttccacacacagtccaccgtacgacattttgccctc
aacgtcattgccctgacactcaaccagggcctcatccatcctgtacagtgtgtgccctac
ctgattgccatgggaacagacccagagcccaccatgaggaataaggcagaccagcagctg
gtggagattgataagaaatacagcggcttcatccatatgaaggccgtggcggggatgaag
atgtcctaccaggtgcagcaggctatctggtcagctaagggtacggtgatccggggttac
cggcaggacgagaccacctccgccctctgcgcccacctcttctccatggtccgatccaac
cggcagcaccgccgagccttcctcatctcactgctcaacttgtttgatgacagctcgaag
attgaggtcaacatgctcctgtacatggcagacaacctagcctgtttcccctaccagatc
caggaggagcctctcttcatcatgcaccacattgacatcacactgtctgtgtccggcagc
aacctgctgcagtccttcaaggagtcccttctcaaagagccacggcagcgggagaagaag
tcaaaagagaggaagtaccagtcagaggaggagaactcgtcatcatcatcgtcatcggag
gaggaacataaccgtcacagcatcagctccaacagtagtgacgaggacaacgaggtggtc
cacaggcccaaaaagcccaaacaccgggcccaggcccctgttaagtcagactctgactct
gacctggaaatggaggacttggacaaggtgatgcagcgtctgcctgacaaccccattccc
ctgttggactttgccaacgcctcacagggaatactactactattggttctaaagcaacat
ctcaagaacctctacggcttctcggacagtaaaatccaaaagtactctccgacggaatcg
gccaaggtatatgagaaggcggtgaacaggaagggtcacgtgcacttcagccctcaccag
acactggacttcttgacctctgacctggccaacgtagaactcacctacgacatcaagagg
aggatcgtcaaacagtacctagatttcaagttactgatggagcatttggaccctgatgag
gaggatgaggaaggtgaggcgtcagccagcgctaacgccagaaacaaagccatcacttca
ttgctgggagggcccagccaccaggaccacaagaaccaccaccaggaccacaagaatcac
caccaggctcctatagagacggacgacgacgagagcgacggagatgagaaagccccagtg
tcatcgcggcggtcgaggaagcacggcgactctgcagaggcttcaggtcacatgaatgag
acattggccgccagggacgtcatcgccctctgctgccccaagtacaaggaccggccgcag
atcgcccgcatcatccagaagaccaacacgggctacagagtgcaatggatggctggctcc
tactctggagtctggggcgaggctaagaaacgggatggacgcaaaacggtgccttgggtg
gacactatcaaggagtctgacattatttacaagaaaatcgccttgacgagtgcacacaag
ctgacgaacagagtggtgcagactttacggtcactgtactcagcgaaggagggaacttcc
taa
DBGET
integrated database retrieval system
