Salvelinus fontinalis (brook trout): 129814151
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Entry
129814151 CDS
T11136
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129814151 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129814151 (vcpip1)
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129814151 (vcpip1)
Peptidases and inhibitors [BR:
sfon01002
]
Cysteine peptidases
Family C64
129814151 (vcpip1)
Ubiquitin system [BR:
sfon04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
129814151 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
129814151
NCBI-ProteinID:
XP_055722956
LinkDB
All DBs
Position
17:complement(30954776..30968362)
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AA seq
1187 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEMKKANSNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSASFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIK
LEQDGSCVIGGDRSLQDKYLMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAARKSVVENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGKLRPDKNYSF
PLNKVVCCYDPERDILIPDYKLSSLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVNVDLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVETQQAVVTQP
PTKIILTGQKSKTIHKEELTLSKAERSLQQSISEQALVTQKRRTDRLKQEQKGRGRPPSP
SAAQEHSSSAPATPTKSSFSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFAELQRSIANEF
TMPPAQQCIRHGFPPKELLPPKDGAENEPVALQHGDRVTVEILRGPENRKASAQSASSSY
STLHSLLSVKSDDPVTSSRMNTSRELQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLFH
QGGVFYNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDAAGHFPVGPDVEDLV
KEALVQLRSESASRSREGSPSHSLLRLGSGGVVRKKEQLQSANAFQGKGHSLGSAPGGSP
PEHKPITRQHSSGVDLSASASKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPGMIEE
QRKKLQEMVSSIQASMDRHLREQSNAGEGIGGPAERTSGAKMSASQSAPGAGIKEASSMD
VSTAGAHGTSVEAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacagggctccaagaaaaaggacaagcgtattttgtccggtacctgccca
gatccgaaatgccaggcgaggctattcttccctgcttacggttcgattagcattgaatgc
acagagtgtggccaacgccacgaacagaataatcttttaaatgtggaagaagtaactgat
ccagacgttgtgcttcacaatttgttaagaaatgccctactcggtgtcactggggcaccg
aaaaagggaacagagctggtgaaagtgatggggctttccaactaccattgcaagctcctt
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgcgg
gaaatgaatcaaggagaaatgttcgactgttcacttctaggcgacagggcgtttctaatt
gaacaggagcatgtatctacggttggctatggcaaggacagatccgggagcctgatatac
cttcacgacactttggaggagatgaagaaagcaaacagcaacaaagaatgcctcattcct
gttcatgtggatggagatggacattgtcttgttcatgctgtgtccagggccctggtaggc
agagagctgttctggcatgcgttgagagagaatttgaaacaacatttcaaacaaaacttg
gatcgctacaaggcactctttcaggattttattgatgcagccgaatgggaggacatcatc
aacgaatgtgaccccctgtttatcccaccagagggtgtgccactgggacttaggaacatt
cacatattcggcttggccaatgtgttgcaccgccccataatcctgttagattcactgagt
ggaatgaggagctctggggattactctgcaagttttctccctgggcttgtgccggaagag
cagtgcaaaggaaaagacgggaagtttaacaagcctatatgtatcgcctggagtagctca
gggcgtaaccactacatccctctcgtcgggataaagaacacccttctccccaagctgcca
ccgaggcttctccccaaggcatggggagtgccacaggagctcatcaagaagtatataaag
ctggaacaagatgggagctgtgtcatcgggggagacaggagcttacaagacaagtatctg
atgagactggtcaatgccatggaggaaatcttcatggagaagcatggcatccacccctcc
cttgtggcagacgtgcatcagtacgtttacagacggactggtgtgatcggcgtccaaccc
gaagaggtgacggaggctgccaggaaatcagtcgtggaaaaccggctacatcgctgtctg
atctgcaatgcactctctgagcttcatgttctaccagagtggctggctccaggtggtaag
ctctacaacctggctaaatccacccacggaaagctcagacctgacaagaactacagcttc
ccgctgaacaaggttgtctgctgttacgaccctgagagggacatcctcattcctgactac
aagctgagctctttgaacacatgcaactggtgccacggcacctccgtgcgccacatccat
ggcaacggctctgtggtgtatctggatggagacagaaccaacacccgttcccaggggggc
aaatgtggctgtggctttaagcactactgggagggaaaggaatacgacaatctgccagag
gctttccccatcactctggagtggggtgggcgggtcgtgcgggagactgtgtactggttc
cagtatgaggttaatgtggacctgaacagcaatgtgtatgatgtcgccatgaaactggtc
accaagcatttccctggggagtttggcagtgagctcctagtgcagaaagtggtgaacacc
attttacatcacactgccaagaagaacccagacgagtataacccagtctccattgacggg
gcgcatgctcagaggctcacagacgtggtggaaacccagcaggctgttgtcacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcacaaagaggagcttaca
ctgagtaaggcagagcggagccttcagcagagcatcagcgagcaggccctagtgacccag
aagaggaggacggatcgactgaagcaggagcagaagggacggggcaggccaccctcccca
agtgctgctcaggaacattcctcctccgccccagccacacccaccaaatcctctttctcc
cccacttccagcaaggagaagaagatccgtgtcaccactagcgatgggcggcaggccatg
ctcactctacaggctcagaccaccttcgctgagctccagaggagcattgctaatgagttc
accatgcctccagcccagcaatgtatccgacatggattcccacccaaagaacttttgcct
cccaaggatggagcagagaatgaacctgtggctctccaacacggggacagggtgactgtg
gagatcctgagaggtccagagaaccgcaaggcatccgcccaaagtgcttccagttcctat
tcaactctgcattcccttctctctgtgaagagtgatgatccagtgacttccagcagaatg
aatactagcagagagctgcaggacaacattgaccttgagatgtcctctctctgtctccta
gcaaccttaatgggagaagatgtctggtcatatgccaaaaaactgcctcacttattccac
caaggtggagttttctacaacattgtgaagaaagatatgggcctgatggatggcaagcac
tgcaccctcccacacctgactggaaagacatttgtttacaacgcagcagaggagcgtctg
gagctgtgtgtggatgcagcgggacactttcccgtgggccctgacgtggaggacctcgtc
aaggaggccctggtgcagctccgctctgaatctgcctccaggagtcgcgagggaagcccc
tctcacagcctgctgaggctcgggagtggaggtgtggtgcgcaagaaggagcagctccaa
agtgccaacgccttccagggtaagggccactcccttggcagcgccccaggcggctctccc
cctgaacacaagcccatcaccaggcagcacagcagcggggtggacctgagcgccagcgcc
tccaagggacctgacctgtctgacatctcagaggacgcgaccaaggagttggtgcgcatg
gctcccggttttgtcaccatgaaagacagccgacacctggaccctggtatgatcgaagaa
cagaggaaaaaactacaggagatggtctcatccatccaggcctccatggacaggcacctg
agggagcagagcaatgcaggggaaggcattgggggccctgcagagaggacaagtggggct
aagatgagtgcttcccaatctgccccaggggcaggcatcaaggaggcctcttctatggac
gtatctactgctggtgctcatggcacatcagtggaggcagggaacaagcctgatggaaag
gatgcagggtcagaggagctggaggaaatggatagccaggatgcagagcataccaatgcc
ctggagccaatggatcattcctga
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