Salvelinus fontinalis (brook trout): 129814213
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Entry
129814213 CDS
T11136
Symbol
clcn2a
Name
(RefSeq) chloride channel protein 2a isoform X1
KO
K05011
chloride channel 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129814213 (clcn2a)
Ion channels [BR:
sfon04040
]
Chloride channels
Chloride channel (CLC)
129814213 (clcn2a)
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NCBI-GeneID:
129814213
NCBI-ProteinID:
XP_055723148
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Position
17:34960875..35021627
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AA seq
1106 aa
AA seq
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MHGTRRDIPHFYSLCYTKDGGAQLTVRDRSLEEDKHTEGTELPDEGNMYGRYTQELGVYA
KEEAARLRDGGGLRRVTSVRSRSAELLEYEKDPCAKCHVCTSRCQKFLISRVGEDWIFLI
LLGLVMALVSWVMDYAIAFCQQAQKWMYGGLDSNMLLQYLAWVTYPVVLITFSAGFTQIL
SPQAVGSGIPEMKTILRGVVLKEYLTFKTFVAKVIGLTCALGSGMPLGKEGPFVHVASLC
AALLSKFLAALFGGIYKLKEEPFEGNKNELRNTEMLSAACAVGVGCCFAAPIGGVLFSIE
VTSTFFAVRNYWRGFFAATFSAFIFRVLAVWNQDEETITALFKTRFRLDFPFDLQELPAF
AILGIACGFGGALFVYLNRLIVECMRKQKTINKFLLRNSSLHVRRLVYPAMVTLIISTLT
FPPGFGQFMAGQLTQHESLVALLDNRTWCRQGVAEEFDYISHSHAWKHPQVNVFITLILF
IVMKFWMSAVATTMPVPCGAFMPVFLIGAAFGRLVGETMAVMFPDGIHADGSVYPIVPGG
YAVVGAAALSGAVTHTVSTAVIVFELTGQISHILPVMIAVILANAVAQSLQPSLYDSIIR
IKKLPYLPELGMGHHEKYNIRVEDIMVRDVRYITLFSSYREVQEVLMTGQLKTLALVEST
GKDSMILLGSIERSQLQSLLSIQLGPTRRLDHLRRHAQDNGTHTHTLGAHTHLTSLDTMD
SPPSPPCTHTHSYTSNSSNTSARHGVRFLVSVAEISTEESSFSAAVSNSQLPLKSAMKTV
PTIHNTETPNSIHTLSINRDTPTPSPLSGSQQTLSCGDPERELLESPAEPEAPESRGPKR
VRISMAAESPEVEDDMTTNEIAEWEEQQLDEPVDFNNCKIDPAPFQLVERTSLHKTHTIF
SLLGLDHAYVTSTGRLVGVVSLRELRKAIEGSVTVTGVKVRPPLASFRDSGNTTSVSEVT
ELHKLWNRHRGLSLPREPTPPDMEDQLDVMDEETPVHFIQDQSDMEFETIPTDNMDPPSE
LVLQESLSITEDQTEEFILECSPSHTDESELACDFDSSHLPETDQLEPAKDHGTPPHGTT
PQNIEQMDQSELQCKQSPNRTEDQSE
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaacgcgcagagatattcctcatttttattcactctgttacacgaaggatgga
ggggcgcagctgacggttagggatcgtagcctcgaagaggataaacacaccgaaggaacc
gaactgccggacgagggaaatatgtatgggcgttacacacaggagctcggtgtgtacgcc
aaggaggaggcggcccgcctgcgtgatggcggggggctgcggagggtcaccagtgttcgc
agtcggtcggcagagctgctggagtatgagaaagacccctgcgctaagtgtcatgtgtgt
acgtctcgctgtcagaagttcctgatctcgcgtgtgggcgaggactggatctttctcatc
ctactgggtctggtcatggccctggtcagctgggtgatggactatgctatcgccttctgt
cagcaagctcagaagtggatgtacgggggactggacagtaacatgctcctgcagtacctg
gcatgggtcacctacccagtggtgctcatcactttctcagcagggttcacacagatactg
tccccgcaggctgtgggttcgggtatcccagagatgaagaccattctgagaggcgtagtg
ctgaaggaatatctcacctttaaaacctttgtggccaaagttatcgggctgacctgtgct
ctgggcagtggcatgcccctgggaaaggagggcccgttcgttcatgtggccagtctctgt
gcagccctcctgagcaagttcttggctgccttgtttggtggaatctacaagcttaaggaa
gagccctttgagggaaacaagaatgagctgaggaacactgagatgctatcagcagcatgt
gcagtgggggtaggctgctgcttcgctgcccccattggaggtgtgctcttcagcattgag
gtaacgtctacgttctttgcggtgaggaactactggaggggcttcttcgctgccaccttc
agtgccttcatcttcagagtcctggctgtgtggaaccaggacgaagagaccatcacagcc
ctctttaagacacgtttccgcctggacttcccctttgacctccaggagctgccagccttc
gccatcctggggattgcgtgtggttttggtggggctctctttgtctacctgaacagactg
atagtagagtgtatgaggaaacagaagaccatcaacaagttcctgctcaggaactcctct
ctccatgtcagacgtctggtgtatcctgctatggtcaccttgatcatctcaaccctcacc
ttcccccctgggtttggacagttcatggctgggcagcttacgcagcatgagtccctggtg
gcgttgttggacaaccgaacatggtgtcggcagggcgttgccgaggagttcgactacatc
agccactcccacgcctggaaacacccccaggttaacgtcttcatcactctcatcctcttc
atcgtcatgaagttctggatgtctgcagtagctaccaccatgcctgtgccatgtggggcc
ttcatgccagttttcctcattggtgcggcatttggacgtttggtaggagagaccatggca
gtcatgttccctgatggcatccatgctgatggcagtgtctatcctatagtgcctggcggc
tatgctgtagtgggtgcagcggcgttgtcgggggcagtgactcacacggtgtcgacagca
gtcatcgtgtttgagctgacgggtcagatcagccacatcctgccggtgatgatagcggtg
atcctggccaacgccgtagcccagtccctccagccctcgctatacgactctatcatcagg
atcaagaaactaccctatctccctgaactgggcatggggcaccacgagaagtataacatc
cgtgtggaggacatcatggttagagacgtgcgttacatcactctcttctcctcctaccga
gaggtacaggaggtcctgatgactggacagctgaaaacactggccctggttgagtccaca
ggtaaggactctatgatcctgttgggttctatagagcgctcccagctccagtcactcctg
tccatccagctgggtccaacgcgcaggctcgaccacctccggaggcacgcccaggacaac
ggcacacacacacatacactgggcgcacacacacacctgaccagcctggacaccatggac
agtccccccagcccaccctgcacacacacacactcctacacctccaactcctccaatacc
agcgcacgccatggggttcgcttcctggtgagtgtagcggagatctcaacagaggagtcc
tccttcagtgcagctgtgtccaactctcagctgccactcaaatctgctatgaaaactgtc
cctactattcacaacacagagacacccaacagtatacacactctctcaattaatagagac
acgccgactccctctcctctgtcaggctctcagcagaccctttcctgtggtgaccctgag
agagagctactcgagagcccggcagagccagaggctcctgagagcagggggcccaaacga
gtcaggatctccatggcggcggagtcccctgaagtagaggatgacatgaccacaaacgaa
atagcagagtgggaggagcaacagctggacgagccagtggatttcaacaactgcaagata
gaccccgccccttttcagcttgtggagcggacatctctgcataagactcacaccatcttc
tccctgctgggactggaccatgcctatgtgaccagtacaggacggctggtgggcgtggtc
tccctcagggagctgcgtaaggccatagagggttcagtgacggtgacaggggtgaaagtt
cgcccccctctggccagtttccgtgacagcggcaacactaccagcgtttccgaggtgaca
gagctgcacaagctttggaaccgccacagaggcctctcgttaccacgggaacccaccccg
cccgacatggaggaccaattggacgttatggatgaggagacccctgtccacttcatacag
gaccaatcagatatggagtttgaaaccatccccactgacaatatggacccgccatcagaa
ttggttcttcaggaaagcctctcaataacagaggaccaaacagaggagtttatcttagag
tgcagcccttcccacactgacgaatcagagctggcctgtgattttgactcctcccacctc
cctgagactgaccaattggagccggcgaaggatcatggaaccccaccccatggaaccaca
ccccagaacatagagcaaatggaccaatcagaactgcagtgtaagcaaagtcccaaccgc
actgaggaccaatcggaatga
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