Salvelinus fontinalis (brook trout): 129814231
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Entry
129814231 CDS
T11136
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129814231 (chd7)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129814231 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
129814231
NCBI-ProteinID:
XP_055723188
LinkDB
All DBs
Position
17:35366142..35454727
Genome browser
AA seq
3202 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMPHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPVVNGMASPHSRYHNNPQQPGGGHHVYSGA
QGDGRGQPFPDGGAVWGPQAGPGQGRPPFQQQQAATQAPSHQQHGPSGPQGHGHQMGPYM
GRADYATMQGHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQ
PPQQQPPAQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPGAV
TSSGQYPPYPQYGNLNQGLAGSAGMSPVMSLSSTSNNSNAMGPAQVQRYPNVGGPPQRYT
GPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMRGM
GTPGGTPPPQQGRPPSAGLAPEVGGYPGVPLQPPNPMAPPQRNPTPMGAQQPHPHLQHHT
QHPSHPQQHPHMPPGQQLYPGMPPNQRVPLGQVRPPGPMAHGEPPGPQDQRLLPLQQQAP
RPGQQLQPPPMAFQQLQQVHPAQAALPPSQAQTHLAGPHHQNSPPNQPPWAPPPHQSPPT
PQKVPHIQYSPSDPSSATTASDRTSASGANLQPAYRDQQPTDTEQKPKKKKKKKKANVIE
GEKGEEGEKGEEGKKQKKKKKKKGVMEEGDEERKPGVGDSCGAEVDPLTGALEESPAADK
KTKKKPKEKEPKEPKPPKTPKMPKTPKDPKEKKARSTTPKAKIPKKHSSTKKVEAAEGGG
SSVKETKRKREPSVSVNSDVEKSPPPPSDEEDDDGVQKRRSSRQVKRKRYTEELEFRISD
EDHDGDSPAPKSPSNNSEQQEVLETEGPVVEKIMAMRMGKKEMESGEEMEVEEFYVKFKS
FSYLHCRWADLEELEKDKRIHQKVKRFRAKQALATFVTEMDDEPFNPDYVEVDRVLDESE
STDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVAARQPETKRVERPPTDG
WQKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL
KGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDAQSRVIK
GAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLL
TGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQVPNLL
NTMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQAAGKLVLIDKLLPKL
KAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVF
LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYER
EMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEEDEGSKF
CEEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDM
DAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDRAQGY
PRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLAYCLLHYRGDENIK
SFIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASCNPDL
LLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMDIWIPQPFHAE
VPADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDAKAIAAEQRGADMMA
DGPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESKPGENGAGSRGAGRL
YWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPREQLLSMVTDGGAYVH
EGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRREEADFYRVVSTFGVIY
DTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQVKTDTELPDPTLIIDP
ITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEWWDCGRHDRDLLLGAS
KHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPRDGAPSTASEQAAAEKPSHVKE
EEEEEGKVVKEEGDNDLPCTKAEKQDEQEGKDEEMEGEKEEKAASPKKELNEEKAKEEGE
DLKDEEDQELKEEKMEVNGDADGETSKEAEPEKEDPPNEDVGDQDKNPEFQERPESSKAS
EDQETKKEKGGSPAKSPKSPNPVAEKGPEEEDEEKMEEDDKSEKSSQAEVGATSEQKNFD
EESNASLSTTARDETRDGFCPEDGEPSAIQRTFSFSFWPKDRVMINRMDNICEAVIKGKW
PANRRQFFDIPGLLPGYPGPMALESPQQRRGLAELSMVAAAQTSFSGSEDLTLSPQVNED
ALSMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQSQAMDLTKGMHHHK
AASSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLPTRRRRGRRKNVEGL
ELLFINNKRGATEDSEGTKASVEGVQMPPRSYRHNIPSPSASARVPSVSAIEDGDAGTPS
DKDLRDWLRQHPTYTMDMPTAYTPKSEELLLSSQFPKPKQKRHRCRNPNKIDINTLTGEE
RVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQSGFLPEAMFDRLLT
GPVVREEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMNGLFGGMDLTSLQGL
QSFQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGGLPNMFGLGGLFGNNLAAASA
AATPAAASNGTNDEGDSDETSKRDDGEGGEEGDEEKDTGVESSEANRDAVALNAAAAAMA
ASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMPGFPPTTLADLQSAMAGAMGA
ASGAQGQEKEPSQAGPAPDRPAAATADPETADDSDSAESLEKTAESSALEDEASALAEEA
DSPQDLAAEDEEEGEDAPEKSD
NT seq
9609 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgttgagcctgttcggggacgacgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccatggggcagcag
atgccccacgagcaccagggctacggttcgctctcctccaactccctccaccacccctcg
caggccgttcccggacagcccaagatgggccacccctacgaccccttcgcgggctacgag
cagcagcagggccggatgttgggcaacgggcccgtcgtcaacggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccacgtctattctggagcg
cagggtgacgggcgcggccagccattccctgacggaggagccgtgtggggcccccaggct
ggccccgggcagggaaggcctccattccagcagcaacaggctgcaacccaggccccctcc
caccaacaacacggcccctcagggccccagggccacggccaccagatgggcccctacatg
ggccgggccgactatgcgaccatgcagggccactctggccagactcagacgcctcctagg
atcaaccacttcccccaaggtatgggccaggagcccagccactacatgggccacgtgggg
ctccagcagaaccccagcatgacaggtccccccatgcgccacccagcccagcaacagcag
cctccacagcagcaaccgcctgcccagcagttcctccaccggcccagccaggaacccatg
gcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctggccggg
aggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggtgctgta
accagctcagggcaataccccccctacccccagtacggcaaccttaatcagggattagcc
ggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacagtaacgcc
atggggccagcccaggtccagcgctaccccaatgtaggtggacccccacagcgatacacg
ggcccccaggtacaccagcagcctgtccaccccaaccaaatcaccggacagcctatgcac
ccttcccagcccatgcacccctcccaggcacaggccaccccccaacagcaaccccacctc
cccacaccgcctcagggatcttacggttctcccccctccatgtccccaatgaggggcatg
ggaacccctgggggcacacctccgcctcaacagggccgcccccctagtgccggcctggct
ccagaggtagggggctacccaggagtcccactccagccccctaaccccatggcccccccc
cagagaaaccccactcccatgggtgctcagcagccacacccccacctgcaacaccacact
cagcacccttcccacccgcagcagcacccccacatgcccccgggccagcagctctacccc
ggcatgccccctaaccagcgagtcccactcgggcaggtgagacctccaggtcccatggcc
cacggtgagcctccaggaccccaggaccagcggctgctccctctccagcaacaggctccc
agacctgggcagcagctgcagcctcctcccatggccttccagcagctgcagcaggtgcac
cccgcccaggctgctttgcccccgtcgcaggcccagacgcacctggccggcccccaccac
cagaactctccacccaaccagccaccctgggcgccaccgccacaccagtcgcctccaacc
ccccagaaagtgcctcacattcagtattccccttcagatccatcatccgcgacgacagct
tccgacaggacatccgcctcgggggcaaacctccagccagcctaccgtgaccagcagccc
acggacacagagcagaagccaaaaaagaagaagaagaagaagaaagccaacgtgattgag
ggggagaagggagaagagggggagaagggagaagaggggaagaagcagaagaagaagaag
aagaagaaaggagttatggaggaaggtgacgaggagaggaagccgggtgtcggggacagc
tgcggggctgaggttgaccctctgacaggcgccctggaggaatcgccagcggcggataag
aagaccaagaagaaaccaaaggagaaggagcctaaagaacccaagccacccaagactccg
aaaatgcccaagacccccaaagatcccaaggagaagaaggccaggagcaccacccctaag
gccaagattcccaagaagcacagcagcactaagaaggtggaggcagcggagggcggtggc
agcagtgtgaaggagaccaagaggaagagagaaccgtcagtgtcggtcaactccgatgtg
gagaagtcacccccacctccctctgatgaggaggatgacgacggtgtccagaagcgtcgc
tccagtcgtcaggtgaagagaaagcgctacaccgaggaactggaattcaggatctcggat
gaggaccatgatggagactccccggctcccaagtccccctccaacaactctgaacagcag
gaggtgttggagacggaggggcctgtggtggagaagatcatggccatgcgcatggggaag
aaagagatggaatcgggagaggaaatggaagtggaagaattctatgtgaagttcaagagt
ttctcctacctgcactgtcgctgggcagatctggaggagctggagaaggacaaaaggatc
caccagaaggtcaagcggttcagggccaagcaggccctcgccaccttcgtgacagagatg
gatgacgagcctttcaacccggactatgttgaggtggaccgggtcctggacgagtcggag
agcacagatgagaacggcgagcctgtcaacctgtacctggtgaagtggtgctccctgccc
tatgaggacagcacgtgggagctgaaggccgacatcgacctggccaagattgaggagtac
gaggccgtggcggcccgccagcccgagaccaagcgcgtggagcgacctcccaccgacggc
tggcagaaatccgagagttccagggattataaaaacgacaacgcactcagggaataccag
ctggagggagtgaactggctgctcttcaactggtacaatacacggaactgcatcctagca
gatgaaatgggcctgggcaagaccatccagtcaatcacattcctctatgagatctacctg
aaggggatccacgggcccttcctggtcatcgcccccctctccaccattccaaactgggag
agggagttccgcacctggaccgaactcaacgtgatcgtctaccatggcagccaggccagc
cgcaagaccatccaggcctacgaaatgaactaccgtgacgcgcagagtcgtgtgataaag
ggagcgtacaaattccatgcggtcatcaccacgtttgagatgatcctgacggactgcccg
gagctgcgcagcgtcccgtggcgctgtgtggtcatcgacgaggctcaccgcctcaaaaac
aggaactgcaaactgctcgagggactcaagatgatggacatggagcacaaggtgctgctg
accggaacgcccttgcagaacactgtggaggagctcttcagtctgctcaacttcctggag
cctgaacgcttcccctcagagaacaccttcatgcaggagtttggcgacctcaagactgag
gagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcgtcgtctcaaggag
gatgtggagaagaacctggcacccaaggaggagaccatcatcgaggtggagctgaccaac
atccagaagaagtactaccgggccatcctggagaagaacttctcctttctgtctaaagga
ggaccgggaggaggtggtggtgcatggggaggcggaggggctcaggtccccaacctgctc
aacaccatgatggagctgaggaagtgctgcaaccacccctacctcatcaacggtgcagag
gagaagatcctggaggacttccgcgagaaccaccacgccgagatggcccagttccacctg
caggccatgatccaggcggcgggcaagctggtgctgatcgacaagctgctgcccaagctg
aaggccgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggacatcctg
gaggactacctcatccagaaacggtacccgtatgagcgtatcgacggccgcgtgaggggt
aacctccggcaggctgcgatcgaccgcttctctcgaccggactctgaccgctttgtcttc
ctgctgtgtacccgggccggaggcctgggcatcaacctgactgctgcagacacctgcatc
atctttgactcggactggaacccccagaatgacttacaggcccaagccagatgccacagg
attggccagagtaaggcagtgaagatctatagactgatcaccaggaactcctatgagaga
gagatgtttgacaaggccagcctcaagctgggccttgacaaggctgtgctgcaatccatg
agtggccgagagaacgcagccaatggggtgcagcagctgtcgaagaaggaagtggaggac
ctcctccgcaaaggagcttacggagctctgatggatgaggaggacgagggctcgaagttt
tgcgaggaagacattgaccagatcctccagagacgaacccagaccatcaccattgagtcc
gagggcaaggggtccaccttcgccaaggcgagcttcgtggccgctgggaacaggacggac
atttccctggaggacccggacttctggcagaagtgggccaagaaggcggagctcgacatg
gatgccatcaatggacggaacaccctggtaattgacactccgagggtacggaagcagaca
cgccactacagctcaatgaaggaggacgagttggcggagttctccgagctggagagcgac
ggcgagaacgagaagcccttgaccaaacccaggcggccacaggaccgagcccaagggtac
ccccgcagcgagtgctttagggtggagaagaaccttctggtttatgggtggggtcgctgg
ggagacatcctgtcccacgggcgtttcaagcggcccctgcgggagcaagacgtggagacc
atctgccgtgccctgctggcctactgcctgctgcactaccgtggcgacgagaacatcaag
agcttcatctgggacctcatcacgcccaccgaggacggacagagccgcacgctcaccaac
cattccggtctgtctactccagtaccacggggtcgtaaggggaagaaggggaaaccagcc
ccgcctgcccctccccagctccccagggcagagtggctggccagctgtaaccctgacctg
ctactgcaggaggacagctacaagagacacctcaaacaccactgtaataaagttctcctg
agggtccgtatgctctactatctgcgacaggaagtcatcggtgaccaagccgaccggatc
ctagagggaacagactcaagtgaaatggatatctggatccctcagcctttccacgccgag
gtccctgccgattggtgggacagcgagtcggacaaatcgctcctcatcggcgtcttcaaa
cacggctatgagaagtataactcggtgcgtgccgaccctgcgctgtgtttcttggagcgg
gtgggcatgcctgatgccaaggccatcgctgcagagcagaggggggcggacatgatggca
gatggtccggagggagaggatgaggacccagagtacaagcctctccgcatgccctttaaa
gatgagatggatgacttcactaactctccccttgatgacaaagaggaagctatggatgtt
gagagtggtgaatctaaaccaggtgagaatggagcaggcagcagaggggcgggtcgtctg
tactggccggcagcctcggccctcaccgctagactccgccgcctcatcactgcctaccag
cgcacgcacaaacgagagcagctccgccaggaggccatggcccggcccgacggccgccgc
cgccggcggccccgagaacagctactctccatggtcacagatggaggggcctacgtgcat
gagggcggagccttcatggcagagggcagtccttatatggccaagggcggagcgttcatt
cctgaggcgacggctctcctggcggaaggaggggccttcttcaaagagaggcgtcaaagg
tggaccaggcgtgaggaagccgacttttaccgcgtggtgtccacgtttggcgtgatctat
gacacggcccgtcagcgctttgactggacccagttcagggccttcgcccgtctggacaag
aagactgacgagagcctggagaagtactacttctccttcgtggccatgtgcaaacgggtg
tgtcgcatgcaggtcaagaccgacacagagctcccagaccccaccctgatcattgacccc
atcacggaggagcgcgcatcacgcaccctttaccgcatcgagctgctgcgccgcatccgc
gagcaggtgttgccccaccccctgctgggcgagcgcctgcgcctctgccagcccagctct
gacctgccggagtggtgggactgcggcaggcacgaccgcgacctcctcctgggcgcctcc
aagcacggcgtgagccgcaccgactaccacatcctcaacgacccagccttgggcttcctt
gaggcccacaggaagttcaccaaagggggatcggctggggcgcctcagccgccccgcgat
ggtgctccctctactgcctctgagcaggccgctgctgagaaaccctcccatgtcaaagag
gaggaggaggaggaaggcaaggtggtgaaagaggaaggtgacaacgaccttccatgtact
aaagccgagaaacaagacgagcaggaaggcaaggacgaagagatggagggagagaaagaa
gagaaggctgcgtctcccaagaaggagttgaacgaagagaaagcgaaggaggagggagag
gacctaaaagacgaggaagaccaagaactgaaggaggagaaaatggaggtcaacggggat
gctgatggagagacttccaaggaggccgaacctgagaaagaagaccctcccaatgaggac
gtcggggaccaggacaagaatccggaattccaggagagaccggagtcttccaaagcatcg
gaagaccaggaaaccaagaaggagaaaggtgggagtcccgccaagtctcccaaatctccc
aatccagtggctgagaaaggccccgaagaggaggatgaggagaagatggaggaagacgac
aagtctgagaagtcgtctcaagctgaagttggtgccacctctgagcagaagaactttgac
gaggagagcaatgcctcactgagcaccacggccagagacgagacccgcgatgggttctgc
cccgaggatggagaaccctcagccatccagagaaccttctccttctctttctggccaaag
gatcgcgtgatgatcaatcgcatggacaacatctgcgaggcggtcatcaagggcaagtgg
cccgccaaccgccgtcagttcttcgacatcccgggcctgttgcctggataccctggcccc
atggcgttagaaagcccccagcagaggcgcggcctggccgagctgtcgatggtggcggct
gctcagacgagcttcagtggcagcgaggacctcaccctctcgccacaggttaacgaggat
gctctgagcatgtcgttgccaaagcagcgtcgtcgcaggcggagaaaggtggagattgag
gcggagcgcgccgccaagcgaaggaacctgatggatatggtggctcagctcagagagtct
caccaacctgagtcccagagccaggccatggacctcaccaagggcatgcatcaccacaag
gcagcgtcgtccctggcgggctactccagcagcagcatggtgccttctgctaccctcaag
gctcagatggagctgctacaggcggccacgccttccagacatagggccaatggctcattg
gccgatgccgacctgcccacccggaggagacgaggccgcaggaaaaatgtggaggggcta
gagctgctgtttatcaacaacaagagaggagccacggaggattccgaggggaccaaagcg
tcggtggagggggtgcagatgcccccacgttcctaccgccacaacattcccagtcccagc
gcatccgcccgcgtcccctctgtcagcgctatagaggacggggacgctggtaccccctct
gacaaggacctgagggactggctcagacagcaccccacgtacacaatggacatgcctact
gcatacacaccaaagagtgaggagttgctcctctcctcccagttccccaaacccaagcag
aagcggcaccgctgccgaaaccccaacaagatcgacatcaacactctcaccggagaagag
agggttcccgtggtcaaccggagaaacggcagaaagatgggtggagccatggcgccgccc
atgaaggaactgccccgatggctcctggagaacccagagtttgccatcgctcctgactgg
accgacattgtcaagcaatcgggcttcctccctgaggccatgtttgaccgtctcctgacg
gggcccgtggtgcgcgaggagggcgtccgtcgtcgggggagacgccccaaatcggagatc
gccaaggcgacggcggctgccgcggcagctcaggcccaggctgcatcgtccgggggcctg
aaccctctgctgatgaatggtctgtttggaggaatggacctcaccagcctgcagggccta
cagagcttccagagtcttcagctgcagctcatgggcttccccggcatggggggggctgac
tctaaacacgcctcagccatgctgcctctcatgctgcctggtatggctggtatgggcggc
ctgccaaacatgtttggcctgggaggcctgttcggaaataacctcgccgctgcctcggct
gcagccacgcccgctgcagcctccaacggcaccaatgacgagggcgattcggacgagacg
tcaaagagagacgacggggagggcggagaagagggggatgaggagaaggacactggggtg
gagtcgagcgaggctaacagggacgccgtggctctgaacgcagccgctgccgcaatggcc
gcctccggcatgtcggccagctccctggccttcaaccctttcctgctgtccaccatggcc
cctgggctcttttccccctacatgttcctgccccctggcctgggaggtctcactatgcct
ggcttcccccccaccaccctggctgacctgcagagcgccatggctggagccatgggggct
gcttctggagctcagggccaggagaaggagcccagccaggctggccctgccccggaccgc
cctgccgccgctaccgcagacccagagacagccgacgacagtgactcagcagagagcctg
gagaagacggccgagtcgtctgccctagaagacgaggcctccgcattggctgaggaagcc
gactcgccgcaagacctagcagccgaggatgaggaggaaggagaggatgcccctgagaag
agtgactga
DBGET
integrated database retrieval system
