Salvelinus fontinalis (brook trout): 129814276
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Entry
129814276 CDS
T11136
Name
(RefSeq) rab effector MyRIP-like isoform X1
KO
K22237
Rab effector MyRIP
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129814276
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129814276
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
129814276
NCBI-ProteinID:
XP_055723274
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All DBs
Position
17:complement(37370531..37420676)
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AA seq
1513 aa
AA seq
DB search
MRARQLTRTTSGQRPGFAYCTGVELRRRRLGHGPVSPELSGDNRLGQGVGLTVVPESAMR
RKLDMSGLTDDEAEHVLQVVQRDMRLRKKEDERLSELKQELDEESSRCSLLSRQHRFNER
CCIRCCSPFTFLVNPKRPCLDCKYNVCKTCRSYSKKDKAWVCSVCQKGRLLKTQSLEWYY
NNVKCRFKRFGSAKVLKTLYRKHLAEQGTLGELTEGSTYEESIGNEGSVCSENAFYRQSE
EHSMAETLTVALRVAEEAIDEAIAKAEGHTDSQDKQSEARYLRDHREELIEELATTIVQK
IIRRRKNLAEMKPDYDLDWLPDNQSGDQPLASSSPSSKISRTTSARAKASIWRSHSAFSL
LDDNVMMQCSGVSQDSQHGLKKEGGAAGLANWKSVDRLDNSMLKSPDGNWIAQQSTQLSR
PSLLTKRKSLVFSVLEKESGVISAYDEMGSDDAEGGEGAWGAALLEIRRKMTNANNNQGS
EAPDAQASADQQHSLPSHLLDHHASTDTLNSESEVGEDQIRGQGPKPQKPLLAVLKRKVP
VEHRCTPSSRRSSRPGIFDVNFNPGGTEAESSGADELEEGGKVRRTRRRKRTKKDQGEGR
GEEYSSMVLDALAKKLSVKKTSQSGAVTPDTLTLDGGLTSRSLTPEPRGPEGEAPGCGAP
KGQGGGTMGVTINLEQELTIRLKELASQVGLAHLSSSEDELDRSGEDEGGRKGRREGTQE
EERLWHIEIEMEGGRVGEGEERTKEREGDGGGELKSTLIQLASQVRGSEFSSTEDELDRV
GRVEREWERERVEERTKKREREGREEHTVKLRMLASQVTHFSSTEEELDRVGVSDGEMEE
QREGEREGEKEELTYKRCKLTRQVNDAQLSSTEDELDRVGLYDEEMEKGREERGGEGGGE
REEIDAEALWEMEGDKEELTSKLRDLASLVSASQFSSTEDELDRVGKNEGEKEEGSKGDK
MKLSNRVADWVRERCGEMEGKWHGERWGEMEGERRRLQVERVREKPWYQGGMEVEGRMMN
KVRRDSIGELDVRLFDFEDESEKEGELQSEEMDTKVEEEGVMKVQRMMEKMFEGGKEGKR
AREAERKVERGRRDTELGGRERETTESVDTVEGEVMFDKIISNLEHTLGGMEVEMDGEMV
ADPEREGREEDKNQTKVRESEFMKEEEIDEYLINEMLMLEQLSDSFGTLDKTGVKPQEKA
GGKERERDSSDKTVERVVERGEKEAREKDEQTETETHKSILPQILDGRKEQISYQTKSET
SRDLEEESKGVERGGYEGGEVEEQTSDKEMDDLGEREGENFGKNTDEKETESNRTKDPEE
SAPCVQEEILSSEEIQNRYSAMSLRSITTEVLTVLNATEDLLQGVEGGDYACSPPYTPSL
PPNTDTKRLDEQLSRLEENVYVAAGTAYGLEAELDDLEECAGAIGDATSDLELSYLEEQV
ASAAAQVHQSDLQTQTFALEKRRKRGILPRVLPRVSDIAARITALKNAGLNVVPQNRFTK
PKKQPKIKKPKPD
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacgacagctgacacgcacaacatctggccagagaccgggatttgcttactgt
accggtgtggaactgagaagaagaagactgggacacggacccgtctctcctgagctcagt
ggagacaacagattggggcagggtgttggattgacagtggtacctgagtcagccatgagg
cggaagctggacatgtcgggactgacggacgatgaggcagagcacgttctacaagtggtg
cagcgggacatgaggctccggaagaaagaggacgagcgcctcagtgagctgaagcaagag
ctggacgaggagagtagtcgctgctccctgctctcccggcagcatcgcttcaacgagcgc
tgctgcatccgctgctgctctcccttcaccttcctggtcaaccccaagcgcccgtgtctg
gactgcaagtacaacgtctgcaagacctgccgctcctacagcaagaaggacaaagcctgg
gtctgctcggtgtgtcagaagggcaggcttctgaagacccagtccctggagtggtactac
aacaatgtaaagtgtcgcttcaagaggtttggtagtgccaaggtgttgaagacactatac
agaaaacacttggcggagcaagggacgctgggagaactcacagagggtagcacgtatgag
gagagcatcggcaacgagggcagcgtctgtagtgaaaacgccttctacagacagagtgaa
gagcacagcatggcagagaccctaacggtggcactgagggtggcagaggaggccatcgac
gaggccatcgccaaggcagagggacacaccgacagtcaggacaagcagagcgaggcaagg
tatctgcgagaccacagagaagagctgattgaggaactggccacaaccattgtgcagaaa
atcatccggcggaggaagaacctagctgagatgaagccagactatgacctggactggctc
cccgacaaccagagtggtgaccagcccttggcttcaagctcccccagctccaagatctcc
cgcaccacatcagcccgcgccaaggcctctatatggcggtctcactctgccttctcgctg
ctggatgacaacgttatgatgcagtgctctggggtttcccaggactctcagcatgggctg
aaaaaggagggaggagcggcaggattggccaactggaagagtgttgaccgcctggacaac
tccatgctgaagagcccagacgggaactggatcgcccagcagagcacacagctgtctcgg
cccagcctgctgaccaagaggaagtcactggtattcagcgttttggagaaggagtccggt
gtgatctccgcctacgatgagatgggctcagacgacgccgaggggggagagggggcctgg
ggcgccgccctgctggagatacggaggaaaatgacaaacgccaacaacaaccaggggtca
gaggcaccagatgcccaggcctctgccgaccagcagcacagcctcccctcacacttgctg
gaccaccacgccagcacggacaccctcaactctgaatctgaggtaggagaagatcagatt
cgaggtcaagggccgaagccccagaagcctctgctcgccgtcctgaagagaaaggtgcct
gtggagcaccggtgcaccccctcttcacgtcggtcatcccgcccgggcatcttcgacgtg
aactttaaccctggggggacggaggctgagagcagcggggctgatgagctggaggagggg
ggcaaagtcaggaggacgcgaaggaggaagaggactaagaaggatcagggggagggaaga
ggagaggagtatagcagcatggtactggatgccctggccaagaaactaagtgtgaaaaag
accagccaatctggcgcagtcaccccagacactctgactttggatggtggcttgacctcc
aggtcgctgacccctgaaccccggggtcctgagggggaggcccccggctgcggggccccg
aagggccagggaggagggaccatgggagtgaccatcaatcttgagcaggaactgaccatc
agactgaaagagctggccagccaagttggcctcgcacacctctcatcatctgaggacgaa
ctggacagatcgggagaggacgagggaggaaggaagggaaggagagaaggaactcaggag
gaggagcggttatggcatatagaaatcgagatggaaggagggagagtgggagagggggag
gagaggacaaaagaaagggagggagatggaggaggagagctgaagtcaacactaatccag
ctagctagtcaggtcagaggctcagaattctcatccactgaagatgagttggacagagtg
ggtagggttgagcgtgaatgggagagagagcgggtggaggagaggacaaaaaagagggag
agagaaggaagagaggagcacaccgtaaagttgcgtatgctggctagccaagtcacacat
ttctcatcaacagaggaagagcttgaccgagtgggtgttagtgatggagagatggaggag
cagagagaaggagagagggagggagagaaggaagagctgacatacaaacggtgcaaactg
actagacaggtcaatgacgcgcagttgtcatcaacagaggacgagctggatagagtgggt
ctctatgatgaagagatggagaaagggagggaggagagaggaggagaagggggtggagag
cgggaggagatagacgctgaggcactgtgggagatggagggagataaagaggaactgacc
tccaagttgagagatctggccagtctcgttagcgcctcccaattctcctctacggaagat
gaactggatagagtgggaaagaacgagggagagaaggaagaggggagcaaaggagacaaa
atgaagttgtccaatagagtggcagactgggtcagagagagatgtggagagatggaggga
aagtggcatggagagagatggggagagatggagggagagaggaggaggctacaggtggag
agggtgagagagaagccctggtaccagggggggatggaggtggaagggaggatgatgaac
aaggtgaggagagatagcatcggagaactagacgtcagactctttgactttgaggatgaa
agtgagaaagagggagagctgcaaagcgaagagatggacacaaaggtagaggaagaggga
gtcatgaaggtacagaggatgatggagaagatgtttgaaggagggaaggaaggaaagaga
gcaagggaagcagagagaaaggtggaaagagggaggagagatacagaactgggaggaaga
gagcgagaaacaacagaaagtgtggacactgtggagggagaggtgatgtttgacaaaata
atcagcaacctagagcacacactgggtgggatggaggtagagatggatggagagatggtg
gcggaccctgaaagagaagggagagaagaggataagaaccaaacaaaggttagagaaagc
gagtttatgaaagaagaagagatagatgaatatctaattaatgagatgctaatgttagaa
cagctgtcagacagctttggcaccttagataagactggagtcaaacctcaagagaaggct
ggagggaaggaaagagaaagggacagttcggataagacagtagagcgtgtcgtggagcga
ggtgagaaagaggctcgagagaaagatgagcagactgaaacagagacccataaaagcatc
ctaccacagattttagatgggagaaaggaacaaatatcatatcagacaaagagcgagaca
tcccgagacctggaagaagagagcaagggagtagaaagagggggatatgaaggtggggag
gtagaggagcaaacaagcgacaaggagatggatgatttgggggaaagagaaggggagaat
tttgggaagaatacagacgagaaagaaactgagagcaaccgaactaaggacccagaagag
agcgccccctgtgttcaggaggagatactgtcttcagaggagatccagaataggtattcg
gcgatgtcactgcgcagtatcaccactgaggtgctgacggtgttgaatgcgacagaggac
ctactccagggggtggaagggggtgactacgcttgttctcctccctacaccccttcacta
ccccccaacactgacaccaagaggctagacgaacagctcagcagactggaggagaacgtg
tatgtggcggcgggcacggcgtacggcctggaggcggagctggacgacctggaggagtgt
gccggggccatcggcgatgccacctctgacctggagctgtcttacctggaggagcaggtg
gcatcagctgccgcccaggtgcatcagtctgacctccagacgcagacttttgctttggaa
aaaaggagaaagcgggggattttacctcgggttttacctcgggtgtcggacattgcagcc
aggatcacagctctgaagaatgcaggtctcaacgtggtcccacagaaccgcttcactaag
cccaagaaacagcctaagataaagaaacctaagccagactga
DBGET
integrated database retrieval system
