Salvelinus fontinalis (brook trout): 129814294
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Entry
129814294 CDS
T11136
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129814294
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129814294
Membrane trafficking [BR:
sfon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129814294
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129814294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Lipocalin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Lipocalin_7
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
129814294
NCBI-ProteinID:
XP_055723299
LinkDB
All DBs
Position
17:complement(37719649..37747435)
Genome browser
AA seq
1109 aa
AA seq
DB search
MPADFNGKWELESSEHFEDYMKALNIDFATRKIAVQLAQTKVIIQDGDKFEVKTLSTFRN
YELRFTVGVEFVEHTKGLDNRVVKALVVWDGEKLVGSQKGEKDNRGWKHWIEGDKLHLPL
RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAS
KFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLI
KLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSAPNFTLEG
HEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPI
IITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLGREE
PAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQHNPN
GRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKEKKS
FKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIATEE
SFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSVNRL
NYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDF
GMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELALQLGELKIAYQLAVE
AESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAERDG
KNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKVNQK
AAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSRPATDYPLVTPNEERNILEDATGY
EPKGVPLSLATLVPGEDRREEETTLAAGVLASVLTAPAIPSEPEPEAAPAVAAPEEEESP
GSSEALKNNALDELEDDLDNMELDDIDTTDINLDTTDVNLDTTDVNLDTTDVNLDTTDVN
LDTTDVNLDTTDVNLDTTDVDLDDDFLDD
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagacttcaatggcaaatgggagttggagagcagtgagcactttgaggattac
atgaaagcactgaacattgactttgccacacgcaaaatcgcagtgcagctggcccagacc
aaagtgatcatccaggatggagacaagtttgaagtcaagacgctgagcaccttcaggaac
tatgagctgaggttcactgtgggggtggagtttgtggagcacaccaaaggactggacaac
agggtggtcaaggctctcgtggtgtgggatggggaaaaactagtgggtagccagaagggg
gaaaaggacaaccgtgggtggaagcactggatcgaaggagacaaacttcacctgcctctc
aggctggacatcaagcggaagctgacagcccggtcagaccgggtgaagagtgtggatctc
cacccgaccgagccgtggatgctggccagcctgtacaatggtagtgtctgcgtctggaac
catgaaacacagaccttggtgaagacctttgaagtgtgtgaccttccagtgagagcatca
aagtttgtagccaggaagaactgggtcataacaggagccgatgacatgcagatccgtgtg
ttcaactacaacaccctggagagggttcacatgtttgaggcccactctgactacatccgt
tgtattgccgtgcatcccacccagccctacatcctcacaagcagtgacgacatgctgatt
aagctgtgggactgggagaagaagtggtcttgcagccaggtgttcgagggccacacccac
tacgtcatgcagattgtcatcaaccctaaagacaacaaccaatttgccagtgcttctctg
gacagaaccatcaaggtttggcagctaggctcctctgctcctaacttcacccttgagggt
catgagaaaggtgtcaactgcattgactactacagtggtggggacaagccctaccttata
tcaggagctgatgaccgcctggtcaagatctgggactaccagaacaagacgtgtgtgcag
accctggagggacacgcccagaatgtgtcgtgtgtcagctttcacccagagctgcccatc
atcatcacaggctcagaggacggcactgtgcgcatctggcactcgagtacgtaccgtctg
gagagcacgctgaattacggcatggagcgcgtgtggtgtgtgtgtggcctgcgaggctcc
aacaacgtggccctgggttacgatgaaggcagcatcatcatcaagctggggcgtgaggag
ccagccatgtccatggacaccaatgggaagatcatctgggccaagcactcagaggtgcag
caggccaacctgaaggccatgggcgacaccgagatcaaggacggagagaggctgccgctg
gccgtcaaagacatgggcagctgtgagatctacccccagaccattcagcacaaccccaac
ggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgccatggcactg
aggaacaagagcttcggctcagcccaggagtttgtctgggcacacgactcctcagagtat
gccatcagagaaagcaacagtgtggtcaaaatcttcaagaacttcaaagagaagaagtct
ttcaagccagactttggggctgaaggtatctatggaggcttcttgctgggcgtcaggtca
gtgaatggtctggccttctatgactgggagaacacagagctggtccgccgcattgagatc
cagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagccacagaggag
tccttcttcatcctgcgctacctgtccgagaaagtagccgcctcccaagagaacaatgag
ggagtgacggaggacggcatcgaagacgcctttgaggtccagggggagatccaggaagtg
gtgaagacaggtctgtgggtgggagactgcttcatctacaccagctctgtcaacagactc
aactactttgtggggggagagattgtcaccatcgctcacctggacaggaccatgtacctc
ctgggctacatccccaaggacgaccgcctgtacctgggcgacaaagagctgaacatcgtc
agctactccctgctggtgtctgtgctggagtaccagacagctgtgatgcgcagggacttt
ggcatggctgacaaagtgttgcccaccatccccaaggaacagaggacccgtgtggcccat
ttcctggagaaacagggcttcaagcagcaggctctggccgtgtcgtcagactcggagcac
aggtttgagctggccctgcagcttggggagttgaagatcgcctatcagctggctgtggag
gcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaagtgccagttt
agcctggcccaggagtgcctccaccatgcccaggactacggcggcctgctgctgctcgcc
acggcctcgggcaacgccgccatggtgggcaagctggccgagggcgctgagcgggacggc
aagaacaacgtggccttcatgacttatttcctgcaggggaaactggaccactgtctggag
ctgctgatccggaccaaccggctgcccgaggcggccttcctggcccgcacctacctgccc
agccaggtgtccagggtggtcaagctgtggagggagagcctggccaaggtcaaccagaag
gcggccgagtcgctggccgaccccaccgagtatgagaacctgttccccggtctgaaggag
tcgtttgtggccgagcagttcctccgggagacctgcctgggcaactcccggccagccacc
gactaccctctggtcacacccaatgaagaacgtaatatactagaggatgccacgggctac
gagcccaaaggagttcccctctcacttgccacactggtaccgggtgaagaccgcagggag
gaggagaccacgttggctgctggagtgctggcgtccgtgttgacggcccccgcgatcccc
tcggagccagagcctgaggctgcacctgctgtggctgcacctgaagaggaagagagcccc
ggttcatctgaggcactgaagaacaatgccctggacgaacttgaagatgacctggacaac
atggagctggacgacatcgataccacagacattaacctggataccacagacgttaacctg
gataccacagacgttaacctggataccacagacgttaacctggataccacagacgttaac
ctggataccacagacgttaacctggataccacagacgttaacctggataccacagacgtt
gacctggatgacgacttcttagatgactga
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