Salvelinus fontinalis (brook trout): 129814305
Help
Entry
129814305 CDS
T11136
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03010
Ribosome
sfon04120
Ubiquitin mediated proteolysis
sfon04137
Mitophagy - animal
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
129814305
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129814305
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129814305
04137 Mitophagy - animal
129814305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sfon03011
]
129814305
04121 Ubiquitin system [BR:
sfon04121
]
129814305
Ribosome [BR:
sfon03011
]
Ribosomal proteins
Eukaryotes
Large subunit
129814305
Archaea
129814305
Ubiquitin system [BR:
sfon04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
129814305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
129814305
NCBI-ProteinID:
XP_055723325
LinkDB
All DBs
Position
17:38308956..38310950
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaaaaccttgacgggtaaaaccatcacccttgaggtggaacccagt
gatactatcgagaatgtgaaggccaagattcaagacaaagaaggtattcctcccgaccaa
cagcgactcatcttcgctggcaaacagttggaggatggccgcacgttggcagactacaac
attcagaaagagtccactcttcatctcgtcctgcgtctgagaggaggtatcatcgagcct
tccctgagacagcttgcacagaaatacaactgtgacaaaatgatctgccgcaaatgctat
gcacgtcttcacccccgtgcagtcaactgccgcaaaaaaaagtgtgggcacaccagcaac
ctgcgccccaagaagaagctgaagtaa
DBGET
integrated database retrieval system
