Salvelinus fontinalis (brook trout): 129814327
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Entry
129814327 CDS
T11136
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129814327
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
129814327
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Motif
Other DBs
NCBI-GeneID:
129814327
NCBI-ProteinID:
XP_055723368
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Position
17:38890483..38955780
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AA seq
970 aa
AA seq
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MRHRYAGAVHQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRRGIHACQPQHGDPPPLTSYDIAQRPSHRVCEPAGQPAHLQQNLWAAAGSQPQS
EQPVFQSCHCNFSEKASLSHQRQPLAHPPQPSPSLPPSSSLLFLQESNHGDNLQSSDNYQ
QASNVERCRGGGGGGGGGHLDQKQLLQQQQQQHSRLQHRDPSPEATRANSQKGRTINVCE
SIEANRRAFESQTQDLQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELCRNNQAPLLQQ
HQQDALGRPQHCDQDRNKPGRTNQANQPQHPNQPHHHCRDSRVNSPTQPYGGNSSATGSS
SKSSPNYGSSYHLWPESPHKGEERILIDHHQATTEQKKLSHAGSNPSLSESSGRLPQIAM
NTCKHNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPGKASNES
LVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYG
KVISESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIV
LELLVCAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSK
LFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDT
QEVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLE
LTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQA
IHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLD
SVTGSLQALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWTSTARRRRSPS
TAPHTSSDSG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtccatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcgaagaggtatccatgcctgtcagccgcagcacggcgaccca
ccgcctctgacaagctacgacatcgcccagcgaccttcacaccgggtctgtgaacccgcc
gggcagccagcgcaccttcagcagaacctttgggccgcagccggctcccagccgcagtcg
gagcagcctgtttttcagagttgccactgcaatttttccgagaaggcgagcctttctcac
cagcgccagcccctcgctcacccgccgcagccctccccatctttgccgccgtcgtcctct
ctgctgtttttgcaggaatctaatcacggggataatttgcaaagcagtgacaattatcaa
caggcgagcaacgtggaacgctgccggggaggaggaggaggaggaggaggagggcaccta
gaccagaagcagttgttgcagcaacagcagcagcagcacagtagactccaacacagggac
ccctcccctgaagcaacccgagcaaactcgcagaaggggcgcactataaatgtatgtgag
tcaatcgaggctaatcggcgagcattcgagtcccagactcaggacctgcaacagctacag
caactcccacaattgcgagctcaacaacagctactggtggggagcagcttccctgtctac
tactgcgccaacggttcaggagagctctgtcggaataaccaggcaccactgctgcaacag
catcagcaagacgcactggggcgtccgcagcactgtgaccaagaccgcaataagccaggg
aggacaaaccaagccaaccagccacagcaccccaaccagccgcatcaccattgccgcgac
tctcgtgtaaactcaccaacgcagccgtacggagggaactcgtctgcgactggcagtagc
agcaagagcagccctaactacggctccagctatcacctgtggcccgagagcccgcataag
ggagaagagaggatactcatcgatcatcatcaggcaaccactgagcaaaagaagctgagc
catgctggatccaacccctccctctccgagagcagtggccgactccctcagatagccatg
aacacctgcaagcacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcgg
cgcaacctagcagagctcgactccgaaacacagcccctccagacgctgcacagttctggc
ctggaggtggtggtttccaagggcaacggtgaggaccccggcaaggcgtccaacgagagc
ctggtcagggacgggaacggtgctcctgtgaagaagaacaaagacatcggctataggctt
ggccaccggagggcgctctttgagaagcgaaagagactcagtgactacgcactcatcttc
gggatgtttggaattgtcgtcatggtgacggagacggaactgtcctggggagtttacggc
aaggtaattagtgaatcttcgtactcatttgcactgaaatgccttatcagcctttccact
gttatattgcttggtcttataataatgtaccatgcccgggaaatccagctgttcatggtg
gacaatggggcggacgactggaggatagccatgacgtacgagcgcatcttcttcatcgtg
ctggagctgctggtgtgcgccatccaccccatcccgggccattaccgcttcacgtggacg
gcgcggattgccttcacctacacgccgtcgacggccaatgccgacgtggacatcatcctc
tccattcccatgttcctgcgcctctacctgatcggccgcgtcatgctgctgcacagcaag
ctcttcacggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaatacg
cgcttcgtcatgaagaccctcatgaccatctgccccggcaccgtgctgcttgtcttcagc
atctcctcctggatcattgccgcctggacggtgcgcgtctgcgagaggtatcatgacaca
caggaagtgaccagtaacttcctgggagccatgtggctcatctctattaccttcctctcc
attggctacggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttaca
gggatcatgggagcgggctgcactgcgctggtggtcgccgtggtagccaggaagttggag
ttgaccaaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacga
gtaaagaacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaag
ctggtcaagaagatagatcacgctaaagtgcgcaaacaccagcggaagtttctacaggcc
atccatcaagctcagaaactacgcagtgtaaagatggagcagaggaaactcaacgatcag
gccaacacgctagtggacctggcgaagacccagaacgtgatgtacgacctggtgtcggag
ctgcaggagcgcagcgaggagctggacaagcgcatcggcatgctggaggacaagctggac
tcggtgacgggcagcctacaggcgctgccctgcctcatctcccaagccataacccagcag
cagcaggaatttctggacggtttcctgcaccgcttccggcctgcctcgctgggctcagag
cgctctgaacgctcagagcgctcctggacctccaccgcccgccggcgccgctcgccctcc
acggcgccgcacacctcctctgacagcggctag
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