Salvelinus fontinalis (brook trout): 129814392
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Entry
129814392 CDS
T11136
Name
(RefSeq) parafibromin-like
KO
K15175
parafibromin
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129814392
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
129814392
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
129814392
NCBI-ProteinID:
XP_055723469
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All DBs
Position
17:complement(41033938..41099724)
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AA seq
530 aa
AA seq
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MADVLSVLRLYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKGLLSYLNGESSTSTSIDRSAPIEIGLQR
PTQVKRAADEVSSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDEDITLKQRSFVDAEVDVTRDIVSRERVWRTRTTILQST
GKNFSKNIFAILQSVKAREEGRAPEQRPAQNTTLVDQSIRNKQPVPAAYNRYDQERFKGK
EETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPALQPVPRPVSQARPPPNQKKGSRTPI
VIIPAATTSLITMLNAKDLLQDLKFVTPEEKKKQGIQRDNEVLLQRRKDQIQPGGATLSV
TVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIRAFHLKYD
EQKMDPNVQKWDVTVLELSHHKRHLDRPMFLKFWETLDRYMVKHKSHLRF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtattgagtgttcttcgcctgtacaacatccagaaaaaagaaatcgtcgcc
aaaggagacgaagttatctttggagagttctcttggccaaaaaatgtcaagactaactat
gtcatttggggaactggaaaggagggtcagccgaaggagtactatactctggactccatc
ctgttcctgctcaacaatgtgcatctccctcatccatcctatgtgcgaagggctgcaacc
gagaacattccagttgtcagaagacctgatcgaaagggcttgctttcgtatctcaatgga
gaaagttctacttcaacaagtatcgacagaagtgcccccatagagattggtttgcaaagg
ccaacacaagtcaaacgagcagcagatgaggtgtcatctgaagccaaaaaaccaaggata
gaggatgaggaacgggtgcgtctggacaaggagcgtttggctgctcgactggagggccac
aaagagggcattgtgcaaactgaccagatcaggtcactttccgaggctatgtcagtggag
aagatcgccgccatcaaagccaagatcatggcaaagaagcgctccaccattaagacagac
ctggatgaggacatcaccctgaagcagaggagctttgtggacgctgaggtggacgtgacc
agggacattgtcagcagggagcgggtgtggaggaccaggaccaccatcctacagagcact
ggaaagaacttctccaaaaacatctttgccatcctgcaatcggtgaaggccagggaggag
ggacgcgcccctgagcagaggcctgcacagaacaccactctggtggaccagtccataagg
aacaagcaacctgtcccagctgcttataaccgatacgatcaggagagattcaaaggaaaa
gaggaaacggagggattcaagattgacaccatgggcacctaccacggcatgaccctgaaa
tccgtaacggagggagcgtctgccaggaaggcccagacaccagccctgcagcccgtcccc
agaccagtttcccaagccagacccccaccaaatcaaaagaagggctctcggacccccatc
gtcatcatcccagcggccaccacatccctcatcaccatgctcaatgcaaaggacctactg
caggacctcaagtttgtgacgccagaggagaagaagaagcagggcatccagcgggacaac
gaggtgctgctccagagacgcaaggaccagatccagcccgggggggccacgctcagcgtc
actgtgccctacagggtcatcgaccagcccctcaaactagctccgcaggactgggatcgc
gtggtggccgtgttcgtgcaaggtcctgcctggcagttcaagggctggccttggttgcta
cctgacggatctcctgtggacattttcgctaaaatccgagccttccatctgaagtatgac
gagcagaagatggaccccaatgtgcagaagtgggacgtgaccgtgctggagctgagccac
cacaagcgccatctcgaccggcccatgttcctgaagttctgggagaccctcgacagatac
atggtgaaacacaagtcgcacctgaggttctga
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