Salvelinus fontinalis (brook trout): 129814430
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Entry
129814430 CDS
T11136
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03030
DNA replication
sfon03410
Base excision repair
sfon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129814430 (zgc:110269)
03410 Base excision repair
129814430 (zgc:110269)
03450 Non-homologous end-joining
129814430 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfon03032
]
129814430 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129814430 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129814430 (zgc:110269)
DNA replication proteins [BR:
sfon03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
129814430 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
129814430 (zgc:110269)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
129814430 (zgc:110269)
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129814430 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
129814430
NCBI-ProteinID:
XP_055723512
LinkDB
All DBs
Position
17:42346246..42355154
Genome browser
AA seq
351 aa
AA seq
DB search
MGITKLADLIRSDAPGAISYKEICDYTGKVVALDTFIVLNQFRTAVPNLQFQGPLTGLFF
RTLTFLEHDIKPLFVFDGKPPGEKSAVLEKRAQAAGWSSPSRSGVVSPQTRDCLHLLKLM
GVPIIQAPGDGEALCAHLVKQGVVDAVASEDMDTLPFGGNILIRQLNAKKNSEVIEYSLP
KLLDILKITHEEFVDLCILLGCDYCDKITGLGPKRALTLIQQHRNIENVVLNINRKTHPV
PLFWQYQDARKLFLDAPLTELPNLVWTEPDEEALVHFLCHEKHVKEQRVRGRMQKFSEKR
ERLRKEREEDKAAGQSRQTRMEDFFRVTRKRQQPSETGDSIGTKEKRARSK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgggtattacaaaactggcagatttgattcgtagcgatgcacctggtgctatttcttac
aaagagatctgcgactacacaggaaaggtcgttgcgttggacaccttcattgttctgaac
cagttccgcactgcagtaccaaatcttcagtttcagggtcccttgacaggtttgttcttt
cgaacgctaaccttcctggagcatgacatcaaaccattgtttgtgttcgatgggaagcct
cctggcgagaaaagtgctgtgttggagaagagggcacaggctgcaggctggagctccccc
agtcgttcaggagtagtgtcccctcagacacgggactgtctccaccttctgaagcttatg
ggtgtgcccatcatccaggctccaggagatggcgaggcactatgtgcccacctggtgaaa
cagggcgtagtagacgcggtagcatcagaagacatggacactctgccctttggtggaaac
atcctgatccgccagctcaatgccaagaaaaacagcgaagtcattgagtactctctgccc
aagctgctagacattttgaagataacacatgaagagtttgtggacctgtgtatcttgttg
ggctgtgactactgtgacaaaatcacaggccttggacctaagagagctctgactctgatc
cagcagcaccggaacatagagaacgtggtgctgaacatcaacagaaagacccaccctgtc
ccactgttctggcagtatcaggatgcccgcaagctgtttttggatgcccccctgaccgag
ctcccgaacctggtctggactgagccagatgaggaggccctggtccactttctgtgccac
gagaaacacgtcaaggagcaaagggtacgaggtcgaatgcagaagttcagtgagaagcgt
gaacgcctgaggaaggagagggaggaggacaaggcagcaggacagagccgacaaactcgc
atggaggacttcttccgtgttacacggaaaaggcaacagccgtctgaaactggggattcc
attggcaccaaagaaaagagagcgaggtcaaagtga
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integrated database retrieval system
