Salvelinus fontinalis (brook trout): 129814952
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Entry
129814952 CDS
T11136
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04260
Cardiac muscle contraction
sfon04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129814952
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
129814952
04261 Adrenergic signaling in cardiomyocytes
129814952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129814952
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129814952
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
MCP-like_PDC_1
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
129814952
NCBI-ProteinID:
XP_055724102
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Position
18:complement(10903537..11167724)
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AA seq
1117 aa
AA seq
DB search
MAICAQSYGIFCMFSIQTILIISVSSPATGSLRFPQHYTMMHWAGRIEKELEKTLQLVTG
AQQMKGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTMYPW
QDGIKESDMEYYDSKAESDYTEDEDGEENLMENPYSVKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSSTGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKSSVIQMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQATMRNKKIFKESIMSMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKLVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTYAIDKNGYLLLHPNLQPKIFN
FREPVTLDFLDAELEDSKKEEIRRDMIDGKSGQRKITTLIKSVDERYIDEAMRTYTWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQFPYTKDFESLLPNSFESEGHVFIAPREYC
NELELSNNNTDFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLNT
YGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTLNDEL
LNPENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQV
QQTCGPTSGCEMDCDANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPYLMHALY
NNSFYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWTSAAAWSLFQQLLC
GMAYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAKRLN
NTNLLFVVAEKMPCNTCEVEKLSQAETEFKDDNPSCEDMSAARYRKGPTVCYDYNLAENT
SDCGRGHSFRPSFQTLLTIQLILLYPIASTHILPLLL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtattttctgtatgttctcaatccaaactatcctc
atcattagcgtctcttcgccggcaacggggagcctccgcttcccccagcactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactctgcaactggtcactgga
gcacagcagatgaaagggatttacaatgagaagaagagccagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaaa
aggagagccctggagaggctagccagagaggcggagcagctgcagacaatgtatccttgg
caggacgggatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggatgaagatggggaagagaacctgatggagaacccctactccgtgaagctggag
tttgtggacgatcccaactttaaaaacaaagtgaactactcctacagtgccgtccagatc
cctacagacatctataagggctccccagtcatcctgaatgagctgaactggactcaggct
ctggagagggtgtttattgataaccgccgggaggacagctccctgcgctggcaggtgttc
ggcagctcgacgggggtcacaagatactacccagccactccttggagagcacccaataag
attgacctgtatgacgtgcgcagacgaccatggtacatccagggggcatcctctcccaag
gacatgatcatcattgtggatgtgagtggcagtgtcagtggactcactctgaagctgatg
aagtcctctgtgatacagatgctagacactctgtcagatgatgactatgtgaatgtagcc
aggtttaacgagaaggcagatgccgtggtcccctgctttaagaccttggtccaggccacc
atgagaaacaagaagatcttcaaggagtccatcatgagcatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgatacgggcgccccg
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcccag
gacatttttgagaagtacaactggcccaacaaaactattcgagtgtttaccttttcagtc
gggcagcacaactatgatgtcacgcctttgcagtggatagcttgtgccaataaaggattc
tactacgagattccatccattggcgccatcagaatcaacacgcaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagctggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggttatcactgggaccatgccggtcttcaacctc
accgctgatgcaaactctcagactcagctcgtccttggtgtcatgggagtggatgttgcg
atcaacgaaattaagaggaagacaccaacatataggcttggagccaatggatacacgtat
gcaatcgacaaaaatggctatttgctcctgcaccccaacttgcaacctaagatctttaac
ttcagagagcctgtcactctggacttcctggatgctgagctggaggacagtaagaaggag
gagatccgtcgtgacatgattgatggaaaatcagggcaaaggaaaatcacgaccctcatt
aagtcagttgatgagaggtacattgatgaggctatgcggacatacacctggacaccggtg
gaaggcacagattacagtctcgggctggtactgcccacgtacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtttccatacacgaaggattttgaatct
ctgctgccaaacagttttgagtctgaaggacatgtattcatagctcccagggaatactgc
aatgagctggagctctccaacaacaacactgacttcctgctcaacttcatcgctctcatg
gagaaggtgactcctgactccaaacaatgtgacaacctgctccttcacaacctcatcctg
gacactggcatcatcagacagctggtggagaaggtgtggaagaccaaagacctcaacaca
tatggctttttggccgtgtttgctgccacagatggagggattacaagagtttttcccaac
aaggctgctgagacctgggaggaggaccctgagccttttaacgccagctattaccgccgt
agtctggacaacaagggctacatcttcagagcgccttatcgtaccttgaatgatgagctg
ctgaacccagagaacgacaccatagggatcctggtcagcactgcagtggagatcacagtg
ggagggaagacaatcaaacctgcagtggttggagtaaagctggatcttgaggcctgggtg
gacaaattcaagatcctggctagcaaccaaacaagtccaacaagtgacaaccgccaagtc
caacaaacgtgtggaccaaccagtggctgtgagatggactgtgacgccaacagcgaagac
ctgctgtgttacctagtggatgacggtggtttcctgatcatgtccaatcagaaggactac
tggaacaagattggcatgttcttcagtgaggtggacccctacctgatgcatgctctctac
aacaactccttttacaaccggaagcagtcctttgactaccagtctgtgtgtgacccagtg
ccgagcagcaacaccggggctgcaccaagaggagtctttgtgcccaccattgcagacttt
gtgaacctggcctggtggacatcagcagctgcctggtccctatttcagcagctgctctgt
ggaatggcgtaccacagttggtttgtcacagatgaggtggaggcagaggggatggactcc
agagagaccagctgtgtgacgatacagactcagttctacttcaccaacatcaacagttcc
tatgacatcttgcaggactgtggcaactgctccaggctgatccatgccaagaggttaaac
aacaccaacctgctgtttgtagtagcagagaagatgccctgcaacacctgcgaggtggag
aaactgtcccaggcggagacagagttcaaggacgataacccatcatgtgaggatatgagt
gcagcgaggtatcgaaaagggccaactgtgtgctacgactacaatctcgctgagaacaca
tctgactgcgggcgcggccactccttccgcccctccttccagaccctgctcacgattcag
ctcatcctgctctatccaatcgccagcacccatattctgcccctcctactttaa
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