Salvelinus fontinalis (brook trout): 129814994
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Entry
129814994 CDS
T11136
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129814994
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
129814994
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
129814994
NCBI-ProteinID:
XP_055724189
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All DBs
Position
18:12409024..12414300
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AA seq
434 aa
AA seq
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MDKEQRSSVVFNASKRELFTANNGYKSLQKRLREQWKIQSMKEELSLEKLKGVKLWITAG
PREKFTAAELEVLKQYLDGGGDVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDESVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFYQVKEAGKLAVMGSCHMFSDQYLDKEENSKIMDVVFQWLM
GDNINLNQIDAEDPEITDYTMLPDTGCLSERLRVCLQEGEENPRDFTSLFDMSLLKLSTN
TLPQVISSYKQMNVKHEPLQLITPQFETPLPQLEPAVFPPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDLDTETRFSPF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagcagcgcagcagtgttgtttttaacgcatccaagagagaactgttcaca
gccaacaatggttacaagtccctgcagaagagactcagggaacaatggaagattcagagc
atgaaagaggagctctccttggagaagttgaagggtgtgaagttgtggattactgctggc
cccagggaaaagttcactgctgctgagttggaggtcctgaagcagtacctggatggggga
ggagatgtccttgtgatgctgggtgaaggaggggagatgaagtatgacaccaatatcaac
ttcctccttgaggagtttgggataatggtcaataatgatgctgtcgtgaggaatgtttac
tacaagtatttccatccaaaagaagcacttgtgtccaatggtgttctgaacagagagatc
agtcgggctgcaggcaaagtggtgacggggatcatcgaagatgaaagtgtcgggaacaat
gcacaggccctcacatttgtgtacccgtatggagcgacactgagcgtgatgaagcctgct
gtggctgttctctccactgggtccgtctgcttccccctcaacaggcctgtcctcgccttc
tatcaggtcaaggaggcaggcaaactggcagtgatggggtcctgtcacatgttcagtgac
cagtacctggacaaagaggagaacagtaaaataatggatgtagttttccagtggctcatg
ggtgataacattaatctgaaccagatagatgcagaggaccccgagatcacagattacacc
atgctaccagacactggctgcctgtctgagcgactgcgagtatgcttgcaagagggagag
gaaaatccaagagactttacctccctgtttgacatgtctctactcaaactatcaacaaac
acgttgccccaagtcatcagttcctacaagcagatgaatgtcaaacatgagcccctccag
ctgatcacacctcagtttgagactccccttccacagctggagcctgctgtcttcccgcct
gccttcagggatctgcctccccccatgcttgacctctttgacctggatgaaaccttctct
tctgagaaggtgcgattggcacagctctccaacaaatgcacagacgatgatctagagttc
tacgtgaggaagtgtggggacatcttgggggtgacggggaagttggataaagatcagagg
gatgccaaacacatcctggagcacatcttcttccaggtcgtggagttcaagaagctcaat
caggaacatgatcttgacacagagaccaggttttccccgttctga
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