KEGG   Salvelinus fontinalis (brook trout): 129815012
Entry
129815012         CDS       T11136                                 
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
  KO
K14764  protein SHQ1
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfon03009]
    129815012 (shq1)
Ribosome biogenesis [BR:sfon03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    129815012 (shq1)
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS PIH1_CS Leuk-A4-hydro_C
Other DBs
NCBI-GeneID: 129815012
NCBI-ProteinID: XP_055724236
LinkDB
Position
18:13676131..13715344
AA seq 606 aa
MITPAFELSQDPSFLILTIRVPYTRTSEFDLYIDGDDFKFYAKPYFLRLTLPGKIVEDGR
EKATFDIDKGLFTLRVPKETAGEHFEGLQMLTSLLAPKGSRSAKPLVEDMEACSGIMDGE
EEDDEEEFDWQVEQEVYMDASEEQLKELQKYGFGSQRSGVFTRLQEELSDVIDIRNPDGT
TASERRRKRLDAETSIFCPDHYLADLFEDEEIQGLLKFHPWWSDLCPDSIRQGEAAVSFT
DDEKEQLRKFTNHSYILDKKSRFQVWLSLVDIILAYCYELRTTEGEHNVESPWTIRKLSG
TLCWLETYSSLQEVLVSFGRRVLCYPLYRHFSLVSAAVQDAARIFQSGKACVLKCLLDIH
KVFRENEPAYILNDLYITDYCVWIQRVKSRKVTALADPLRKVSLRKRDLELELEVLETAA
TLVEEEEKVEDGGKSPSRTPLSHSGEESDSEDSSSDSSEESEDSEAEGKDCADRTEGGGE
RAEAIPIHPQPAAPPIHQESCAVLTSSERKPCTLPSAVACPSQLIQELGERVEEGLWISA
QPQGSRHSRSSAQGEAERDCSQPATATDTARTGAFLELSPRRNPLLIVKTDTGDDLDEDD
IDEDDY
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgataactccagcgtttgagttgagccaggacccatctttcctaatcctgaccatccgt
gtgccctacacgagaacatcagagtttgatctctacatcgatggagatgatttcaaattc
tatgccaagccttacttcctcagactgaccttacctggaaagatagtggaggatgggaga
gaaaaggccactttcgacattgataaaggtctttttaccctgcgcgtccccaaggagaca
gcaggggaacactttgaagggctccagatgctgactagtctcctggctcccaaaggctcc
cgctcagccaagcctctggtggaagacatggaagcgtgcagtggtattatggatggtgag
gaagaggatgacgaagaggagtttgactggcaggttgagcaggaggtgtacatggatgcc
tcagaggagcagctgaaggaactgcagaagtatggctttgggagtcagaggtccggagtg
ttcactcgactgcaggaggagctgagtgatgtcatcgacatccgaaacccagatggaacc
acagcgtcagagaggagaaggaaacgactggacgctgagacgtccatattctgccctgac
cattaccttgctgacctttttgaagacgaagagatccagggtctgctgaagttccaccct
tggtggtctgatctgtgcccagactccatccggcagggagaggcagcggtatccttcacg
gatgatgagaaggagcagctaagaaagtttaccaaccattcctacatcctggacaagaag
tcccgtttccaggtgtggctcagcctggtggacatcatcctggcatactgctacgaattg
cgcaccacagagggagagcacaacgttgaatcaccgtggaccatcagaaaactcagtggg
actctctgctggcttgagacatacagctcgttgcaggaggtcctagtgtccttcgggagg
agggtgttgtgttacccgctctacaggcacttttctctggtctctgcagccgtgcaggat
gcggctcggatcttccagtcagggaaagcctgcgtcctgaagtgcttgttggatattcac
aaagtcttccgggagaatgaaccggcctacatattgaacgacctctacatcacagactac
tgcgtctggatccagagggtcaagtctaggaaggtgacagctctggccgatcccttacgg
aaagtatccctacggaaaagagacctggagctggagttggaggtgctggagacggcggcg
acgctggtagaggaagaagagaaggtggaggacggtgggaaaagccccagtagaactcct
ctgtcacacagcggagaggagtccgacagcgaggacagtagcagcgactcgtctgaggag
agtgaggactctgaggctgaagggaaggactgtgctgacagaacagagggaggaggagag
agagccgaggccatccccatacatccccagcctgctgcccctcccatccaccaggagtcc
tgtgctgttctcacatcatccgagaggaagccctgcaccctcccatctgctgtggcctgc
cccagccagctgatccaggagctgggagagagggtggaggaggggctgtggatatcagca
cagcctcagggcagcaggcattccaggagcagtgcacagggagaggcagagagagactgt
tcacagcctgcgactgccacagatactgcccgcacaggtgctttcctagagctgagtcct
cgcagaaaccctcttctgattgtcaaaacagatactggtgacgatcttgatgaggatgat
atcgatgaggatgactattag

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