Salvelinus fontinalis (brook trout): 129815012
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Entry
129815012 CDS
T11136
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129815012 (shq1)
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
129815012 (shq1)
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
129815012
NCBI-ProteinID:
XP_055724236
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All DBs
Position
18:13676131..13715344
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AA seq
606 aa
AA seq
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MITPAFELSQDPSFLILTIRVPYTRTSEFDLYIDGDDFKFYAKPYFLRLTLPGKIVEDGR
EKATFDIDKGLFTLRVPKETAGEHFEGLQMLTSLLAPKGSRSAKPLVEDMEACSGIMDGE
EEDDEEEFDWQVEQEVYMDASEEQLKELQKYGFGSQRSGVFTRLQEELSDVIDIRNPDGT
TASERRRKRLDAETSIFCPDHYLADLFEDEEIQGLLKFHPWWSDLCPDSIRQGEAAVSFT
DDEKEQLRKFTNHSYILDKKSRFQVWLSLVDIILAYCYELRTTEGEHNVESPWTIRKLSG
TLCWLETYSSLQEVLVSFGRRVLCYPLYRHFSLVSAAVQDAARIFQSGKACVLKCLLDIH
KVFRENEPAYILNDLYITDYCVWIQRVKSRKVTALADPLRKVSLRKRDLELELEVLETAA
TLVEEEEKVEDGGKSPSRTPLSHSGEESDSEDSSSDSSEESEDSEAEGKDCADRTEGGGE
RAEAIPIHPQPAAPPIHQESCAVLTSSERKPCTLPSAVACPSQLIQELGERVEEGLWISA
QPQGSRHSRSSAQGEAERDCSQPATATDTARTGAFLELSPRRNPLLIVKTDTGDDLDEDD
IDEDDY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgataactccagcgtttgagttgagccaggacccatctttcctaatcctgaccatccgt
gtgccctacacgagaacatcagagtttgatctctacatcgatggagatgatttcaaattc
tatgccaagccttacttcctcagactgaccttacctggaaagatagtggaggatgggaga
gaaaaggccactttcgacattgataaaggtctttttaccctgcgcgtccccaaggagaca
gcaggggaacactttgaagggctccagatgctgactagtctcctggctcccaaaggctcc
cgctcagccaagcctctggtggaagacatggaagcgtgcagtggtattatggatggtgag
gaagaggatgacgaagaggagtttgactggcaggttgagcaggaggtgtacatggatgcc
tcagaggagcagctgaaggaactgcagaagtatggctttgggagtcagaggtccggagtg
ttcactcgactgcaggaggagctgagtgatgtcatcgacatccgaaacccagatggaacc
acagcgtcagagaggagaaggaaacgactggacgctgagacgtccatattctgccctgac
cattaccttgctgacctttttgaagacgaagagatccagggtctgctgaagttccaccct
tggtggtctgatctgtgcccagactccatccggcagggagaggcagcggtatccttcacg
gatgatgagaaggagcagctaagaaagtttaccaaccattcctacatcctggacaagaag
tcccgtttccaggtgtggctcagcctggtggacatcatcctggcatactgctacgaattg
cgcaccacagagggagagcacaacgttgaatcaccgtggaccatcagaaaactcagtggg
actctctgctggcttgagacatacagctcgttgcaggaggtcctagtgtccttcgggagg
agggtgttgtgttacccgctctacaggcacttttctctggtctctgcagccgtgcaggat
gcggctcggatcttccagtcagggaaagcctgcgtcctgaagtgcttgttggatattcac
aaagtcttccgggagaatgaaccggcctacatattgaacgacctctacatcacagactac
tgcgtctggatccagagggtcaagtctaggaaggtgacagctctggccgatcccttacgg
aaagtatccctacggaaaagagacctggagctggagttggaggtgctggagacggcggcg
acgctggtagaggaagaagagaaggtggaggacggtgggaaaagccccagtagaactcct
ctgtcacacagcggagaggagtccgacagcgaggacagtagcagcgactcgtctgaggag
agtgaggactctgaggctgaagggaaggactgtgctgacagaacagagggaggaggagag
agagccgaggccatccccatacatccccagcctgctgcccctcccatccaccaggagtcc
tgtgctgttctcacatcatccgagaggaagccctgcaccctcccatctgctgtggcctgc
cccagccagctgatccaggagctgggagagagggtggaggaggggctgtggatatcagca
cagcctcagggcagcaggcattccaggagcagtgcacagggagaggcagagagagactgt
tcacagcctgcgactgccacagatactgcccgcacaggtgctttcctagagctgagtcct
cgcagaaaccctcttctgattgtcaaaacagatactggtgacgatcttgatgaggatgat
atcgatgaggatgactattag
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