Salvelinus fontinalis (brook trout): 129815292
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Entry
129815292 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129815292
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129815292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129815292
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129815292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
129815292
NCBI-ProteinID:
XP_055724939
LinkDB
All DBs
Position
18:31732403..31743064
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AA seq
164 aa
AA seq
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MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFVYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLCGCRVRVELSNGDKRSRSRRPGREDYSSRRRGSPPVRRRSPRRRS
FSRSRSRSLSRDRRRERSISRNRNQKPSRSFSRSRSRSRTAERK
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctctggattgcaaggtgtatgtagggaac
ttgggcaacagtggtaacaagactgagttggagagggcgtttgtgtactatggccctctg
cggagtgtgtgggtggctaggaaccccccaggctttgcctttgtcgagtttgaggatccc
agagatgcaaccgatgctgtcagagaactggatggacggacgctgtgtggctgcagagtg
agagttgaattgtccaatggggataaacgctcgaggagccgtcgccctggacgtgaagac
tacagcagcaggcgccgtgggagcccgcctgtcagacgccgctctcctaggaggaggagt
ttcagccgcagtcgcagcaggtctctgtcaagagaccgaagaagagaaaggtctatctcc
agaaacaggaaccaaaaaccttcaagatccttctcaaggtctcggagccgctccaggacc
gctgagagaaagtga
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