Salvelinus fontinalis (brook trout): 129815507
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Entry
129815507 CDS
T11136
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129815507
03041 Spliceosome [BR:
sfon03041
]
129815507
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129815507
Spliceosome [BR:
sfon03041
]
Complex C
Other components
EJC/TREX
129815507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
129815507
NCBI-ProteinID:
XP_055725370
LinkDB
All DBs
Position
18:complement(40486148..40489958)
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AA seq
570 aa
AA seq
DB search
MDKKKKQYAVTASSLVDLKAELYRKQEQFKHEKLGQDAGTSTKAPKIKKPNVWSKQNDGV
SERAQKDVELVAEEENNLDKAKRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIIDK
KRENHAQRESEREDRESSSTIPPPENPGEEWVDYVDALGRSRRCMKKDLPGFKKMDKDFQ
GKRRDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYENIREQEARELGVGYFAF
SQDQEQRRKQRETLDMLRDQTTDQRSKRDQLKEKRKTLLDARLAKVRQRKMKAAKLDGTE
DDQGDEHNQEGKEDLIGPLPPSGGAPEEAPALKKVVVEIQERRDTKPGVPHVREWDRGKV
DFFGEWTSRRRDERESEFAPPSAYFSNNKRQSYGKEAKREKDKPKMAFKWSEGQGGGRKV
PQANPKSTPVSQPQPRSTPIPQPSTPVPSQPQPTPSPAHSQNTVHLQNTPAPPAPQCPPQ
PPPQYPPSQQPQPLYIPPPPPQTHPQFDNPFQPQFAHLPFHPQYAAPPHYPPQYTPQYPP
QPQTQPQCPPQTQPPSQSLDDMLSFYKNYS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgccgtgactgcttcatctttggttgatctgaaagct
gaactctacaggaaacaagagcaattcaaacatgaaaaactggggcaagatgctggaact
agtaccaaagcccccaaaatcaagaaacctaatgtatggagcaaacagaatgatggtgtt
tcagagcgggcacagaaagatgtggaactggtggcagaggaagagaacaaccttgacaag
gcaaagcgcaagctagaggagaaggctaaactgtatgagcagatgaccaaaggagacttt
cctgatgaggagacagagggactttttctggtggatttcacccagaagattattgacaag
aagagagagaatcatgcccaacgagagagtgagagagaggatagagagagctcctccacc
atcccaccccctgagaacccaggcgaggaatgggtggactatgtagatgctttgggacga
tctcggagatgcatgaagaaagacctaccagggttcaagaaaatggacaaagactttcag
ggaaaaagacgtgacccggctgagaaggacctgctgtcagaggacatgcgtagagagctg
caaaggcaggagtgggagagggaggaggaggaggccatgaacagacctgtgggtccaatc
cactatgagaacattagggagcaagaggcccgtgagctgggtgtgggctactttgcattc
tctcaggaccaggagcagcgcaggaaacagagagagaccctggacatgctcagagaccag
acaacagaccagcgcagtaagagggaccagctgaaggagaagagaaagactctgctggat
gctcggctggccaaggtgaggcagaggaagatgaaggcggccaagctggacggaactgag
gacgaccagggagatgaacacaaccaagaagggaaggaggacctgattgggcccctaccc
ccatcaggtggagcacctgaagaggcccctgcattgaagaaggtggtggtggagatccag
gagaggagggataccaagccaggagtaccccacgtcagagagtgggacaggggcaaagtg
gacttttttggcgagtggacgagtcggcggcgggatgagagggagtcggaatttgcccct
ccctctgcgtacttcagcaataataaaagacagagctatgggaaagaggccaaacgtgag
aaggacaaacccaaaatggccttcaagtggtcagaggggcagggtggagggcgcaaggtg
ccccaggccaaccccaaaagtactcctgtatcccagcctcagcccagaagtactcctata
ccccagccaagtacccctgtaccctcacaacctcaacccacaccatcccctgctcattcc
caaaacactgtccatctccaaaatacacctgcacctccagcccctcagtgccccccccaa
cccccacctcagtatcccccctcccaacagccccaacccttatatataccacctccacca
ccacaaacacaccctcagtttgataacccatttcagccccaatttgcacatctacccttt
catccccagtatgcagccccacctcactacccccctcaatacaccccacagtatcccccc
cagccccaaactcagccccagtgcccccctcagacccagcccccctcccagagcctggat
gacatgctgtccttctacaagaattattcttga
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