Salvelinus fontinalis (brook trout): 129815741
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Entry
129815741 CDS
T11136
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129815741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129815741
03036 Chromosome and associated proteins [BR:
sfon03036
]
129815741
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129815741
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129815741
PBAF complex
129815741
GBAF(ncBAF) complex
129815741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129815741
NCBI-ProteinID:
XP_055725799
LinkDB
All DBs
Position
18:52801961..52853202
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AA seq
514 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGMGPGPQVQGGGPGMGPGTPGGRMGLSSGAQNHLYRSPMPGPG
YPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQVQQVQQQRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcggctccaacgggaggtggtggcgggggaatggga
cccggaccccaggtgcaaggtggaggaccaggcatgggacctggaactcctggtggaagg
atgggactctcatcgggcgcacagaaccacctttaccgatctccgatgcctgggcctgga
tacccgagaccaggtgggatgccaccctccagccgtatgacaccccagggtccgcccatg
gggcctccaggctacggctccagccccgtgtcccgaccagggatgcctggcgtcatggat
ccctcccgtaagagacctgctccccagcaggtccaacaggtccagcaacagcgcaaccaa
cataccaagaagaagaaaatggcggataagattttacctcagaggatccgggagctggtg
ccagagtctcaggcctacatggacctgctggcgtttgagaggaagctggatcagaccatc
atgaggaaacgtctggacatccaggaggcactcaagagacccatcaagcaaaagcgaaag
cttcgtatcttcatatccaacaccttcaaccctgccaagcccgacgcagaagacggagag
ggcactgttgcatcatgggagctgcgtgtcgaagggcgccttcttgaagatactgctgtg
tccaagtatgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtc
atcgagttggacaaggacctctatgggcctgacaatcacttggtcgagtggcacaggact
gcgaccactcaggagacagacgggttccaggtgaagaggccaggggatgtgggcgtacgc
tgcactgtcttgctcatgctggactatcagccccctcagttcaagctggaccctcgcctg
gcccgtatgttggggatccacacccagaccaggccggtcataatccaggccctctggcag
tatgttaagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaag
tacctgcagcagatctttgagacccagcgtatgaagttctctgagatcccacaacgtcta
cacgctctgctgatgcctccagaacctatcatcattaaccatgtcatcagtgtggatccc
aacgaccagaagaagacggcctgctatgacatcgatgtggaggtggacgacactctaaag
acccagatgaactccttcctcctatccaccgccagccagcaggagatagctggcctggac
aacaagatccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatg
ttgagcttcgccagagatccccagggcttcatcaacgactggctgcagtcacagtgcagg
gacctcaagactatgactgatgtggttgcgaacccagaagaggagaggagagcagagttc
tatttccaaccctgggcccaggaagccgtgtgtcgttacttttactccaaggtccagcag
aggaggcaggagctggaacaagccctgggaatcagaaacacttag
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