Salvelinus fontinalis (brook trout): 129815897
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Entry
129815897 CDS
T11136
Name
(RefSeq) peroxisome proliferator-activated receptor delta-like isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03320
PPAR signaling pathway
sfon04148
Efferocytosis
sfon04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129815897
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129815897
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129815897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129815897
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129815897
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129815897
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
129815897
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129815897
NCBI-ProteinID:
XP_055726056
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Position
18:complement(28256866..28311143)
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AA seq
675 aa
AA seq
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MEGTRAAVLAPVKSKAPRRDRKRRVGALVRKGGVCRNGTTSPHGECTSDGARGLESSLEV
LKPSLLSKGLGERVGEKEGVRGAEVSPEREEGLGSWDMKSHDEEVVQQEQEDQQEKGSSN
NHSTSNTDSPALSSSCTDSQFPLYAPDCICCCCYCCCCYCCCCYCCYCCCCYCCCCCCCC
REGRCCPAPVCYNTLLVSARSNKVSSYSKESMLLREQTQACKCQVVPSSVSWSFHTTTNG
FDVFDLSQTSSPSLSDQLLLGREDGTGAGINVECRICGDKASGFHYGVHACEGCKGFFRR
TIRMKLDYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGRMPEAEKRKLVAGL
LAGEKVPTTNPNGSDLKSLAKRVNNAYLKNLNMTKKKARSILTGKTSSSPVAYPYPFVIH
DMDSLCQAENGLVWKQLINGTTPNKEIGVHVFYRCQCTTVETVRELTEFAKSIPGFVDLF
LNDQAEQATDGTQTAELGTDMQGQTGRDRESQVTLLKYGVHEAIFAMLPSLMNKDGLLVA
NGKGFVTREFLRSLRRPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLIN
IKQVEEIQDNILQALDQHLLANHTDSKYLFPKLLNKMADLRQLVTENAMLVQKIKKTESE
TSLHPLLQEIYKDMY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaccagggccgccgtcttagcgccggtcaaaagcaaagcccctcgacgggat
cggaagcggcgtgtcggagctttggtaaggaaagggggagtctgccggaacgggaccacc
tccccacatggggagtgcacatcggacggagcgagagggcttgagtcctccttggaggtg
ctaaaaccatccctgctgtcgaaggggctgggagagagagtgggggagaaggagggggtg
cgaggagcagaggtgtcacctgagagggaggagggccttggctcctgggacatgaagtct
catgacgaagaggttgtgcagcaggagcaagaggatcagcaggaaaaggggagtagtaac
aaccacagcacctccaatacagacagccctgccctctccagtagctgcacagattcacag
tttcctctctatgctcctgactgcatatgctgctgctgctactgctgctgctgctactgc
tgctgctgctactgctgctactgctgctgctgctactgctgctgctgctgctgctgctgc
agggaggggaggtgttgtccagcacctgtttgctacaacaccttgcttgtttcagcgagg
agcaacaaagtttcatcatattctaaagagtccatgttactgcgggaacagactcaagcg
tgcaaatgccaggtcgttccatcttcagttagctggtcgttccacacaacaacaaacggt
tttgatgtttttgatctgtcccagacgtcgtctccatcgctgtcggaccaactcctcctg
ggtcgagaggatgggacgggggccgggatcaatgtggaatgtcgtatctgtggagacaag
gcctcagggttccactatggagtacacgcctgtgagggttgcaaggggtttttccggcgg
accatccgtatgaagctggactatgagcgctgtgagcgcagctgtaagatccagaagaag
agcagaaacaagtgccagtactgccgcttccagaagtgcctgctgctgggcatgtcccat
gacgcgatccggtatggccgcatgccggaggcagagaagaggaagctggtggcgggcctc
ctggcgggagagaaagtcccgaccaccaaccctaatggctcagatctcaaatccctggcc
aagcgagtcaacaacgcctatctgaagaacctcaacatgaccaagaagaaggctcgcagc
atcctcaccggaaagaccagctccagcccagtagcgtatccatatccctttgtgattcac
gacatggactccttgtgccaggctgagaacgggctggtgtggaaacagctgatcaacggc
acgacccccaacaaggagataggggtacacgtgttctaccgctgccagtgcaccacggtg
gagacggtcagggagctcactgagttcgccaagagcatccccggcttcgtagacctcttc
ctcaacgaccaggcagagcaggcaacagatggcacacagacagctgagttggggacagat
atgcagggacagactggcagagacagggagtctcaggtgacgctgctgaagtacggcgtc
cacgaggccatcttcgccatgctgccctcgctcatgaacaaggatgggttgctggtggcc
aatggaaagggctttgtgacccgggagttcctgcgcagcctgcggcgccccttcagtgag
atcatggagcccaagtttgagtttgcggtcaagttcaacgccctggagctggatgacagt
gacctggcactgttcgtggccgccatcatcctctgtggagaccgtccggggctgataaac
atcaagcaggtggaggagattcaggacaacatcctgcaggccctggaccagcacctgctg
gccaaccacactgactcaaagtaccttttccccaagctgctcaacaagatggctgacctg
cgccagctggtaactgagaacgccatgctggtccagaagatcaagaagacagagtccgag
acctcgctgcacccgctgctgcaggagatctacaaggacatgtactga
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