Salvelinus fontinalis (brook trout): 129816043
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Entry
129816043 CDS
T11136
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129816043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129816043
03036 Chromosome and associated proteins [BR:
sfon03036
]
129816043
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129816043
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129816043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
C5HCH
Vps8_C_schizo
Motif
Other DBs
NCBI-GeneID:
129816043
NCBI-ProteinID:
XP_055726203
LinkDB
All DBs
Position
2:29878271..29918639
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AA seq
1983 aa
AA seq
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MSSEMLSVPPGTSKLDVLVTKLHEFLAHAPEDDENTLVTESPDGMTNKDCVEPHSTDRTR
LEPQQTSTDTLKQSGCGSRRKPSVVIKHSGLDESGASNESDDDDDGLIINSNGYPDVTRL
PKGTVLVRPEPVENVRDDFRGPEFRCGKSGNLKRAFSRRRGGGEHLEIVSCTACGQQVNH
FQRDSFYQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFC
KKCILRNLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGHLWPEHRKRGRG
EGKSGHYDSHPRHSQNIPVGHWNHGGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNT
TFVKFIQGGMQQKQTTELKLQYLKTFQSVLKGLKKSQTALEEALLEEFREMGLPNGGENP
TFEDTDVPQQEQEGCVEIDISDKNGLHYLKKIAAEHLEENDSDSNGFMDDGRPSSSIEMK
GVLGTEIIPRRGRGRPRKNSKPGEDACNVTKQLVVQISPAPVEQEPLSGPPELEVEVELE
AEEEERKEKVEEREGDCESIELVTEGEYESAEGSESLELEEEPDNRRSPRVKTTPLRRPG
EGKIQPTPSGADSESDSDPDTSPNAEVPQGADEGGLGRGTDDSDSDEVPAVLQRAAMTRS
SDEAESDDGDHRSVTKKCLFGLKKNTPLSPERVVRKRKVPDRSSDSDSSSDDPDLQKEIK
TMTRPRGRPRKVKREDEPTPSKDSPQHRPRGRPRKVKKEDESTSSKEGNTQAAKPQSTPQ
SEHRTKQTPSSSSQEEGDLDSESSDDSGDQKIKPITEEVALLGAAAFHQSSGDEEQPQSG
PSWAAEDDDDPENRIAKKMLLAQIKANYSSGEDFSSDVESSHDDESDREEKEQEDVKDES
SDENGETSSLTSDSESSKTCHRHRLLRHKLSLDNGNPSDQKTAEEDGIEQKVRKSRRTKG
EKLDNQSSDDDSQSQQEESGMSEELSQSENEGNEQMLKSSTSSSSRVERESVRSYLQKKQ
QPPYIVLSDSSVDKSDDEEKDGEEGDNKDTPKGRKKIRRIIVDEHLRSETQRALKEEEER
RRRLAEREQREDFREVIVIEDEASHVACPITTKLVLDQDEGTKEPLIQVHRNLVTRLKPH
QVDGVQFIWDCCCESVKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSKCMNFRTAL
VVCPLNTILNWVNEFEKWQVDMGADKVKVTELATLKRPQERYIALQRWQMDGGVMIMGYE
MYRNLTLGLKVIHGKFKKTFDSTLVDPGPDFVICDEGHILKNEASNISKAMSAIKTKRRV
VLTGTPLQNNLNEYHCMVNFIKENLLGSIKEFRNCFINPIQNGQCADSTPRDVRIMKNRA
HVLHAMLAGCVQRRDYSALTKFLPPKHEYVMAVRVTPLQYRLYCYYLDNFTGARSVVEGA
RGKAGTSLFKDFQILSRIWNHPWCLQLNYISKENKGHFDGKHQGKTERKEKENKGKVVNA
DEDSKDVEVILVWNSTSKGVDVEGDQRAGPLVPVVKALRASTSFRPDSPAADWYKSMLSD
SDATILGHSGKMVLLFEILQMAEELEDKVLVFSQSLITLDMIEDFLDLTNKAKNNRQSSL
YKGDGSWIRNTDYYRIDGSTSATSRMKWVQDFNDATNERGRLFLISTRAGSLGINLVAAN
RVIIFDASWNPSYDIQSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVV
DQQQIQRHFTLFELTELYMFEPDLLDDPNSEKKSKRTTPLLPKDMVLAELLQSCKGQIVC
YHEHESLLDHKEEEELSEADCKTAWAEYEAEGALFLNKAEHSNTNVPSPSTSTMAVSLSS
LYKKTNGQLKNMIYSSCEKVNEAIKSLHSLLNLSLDDYVLRLWQDNPSLDEKQVRAVAQT
WKTSNDKERERRQAIHRDLLAKQQSLTMYIQTILASRKNEITHTATVTNRTPALTDSANK
PTQ
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagagatgctcagcgttcctcctggcacgagcaagctcgatgtgttggtgact
aaactgcatgagttcttggctcatgctccagaggatgatgagaacacactggtgacagaa
agtcctgatggtatgacaaacaaggactgtgtggagccacactcaacagaccgaacccgt
cttgagcctcaacagacctcaacagacaccctgaagcagtctggatgtggttccaggaga
aaaccttcagttgtgattaaacacagtggactggatgaatctggtgcttcaaatgaaagt
gatgatgatgatgatggcttgatcatcaattcaaacggttatcctgatgtaacaagatta
cctaaaggcactgtactggtgaggcctgagccagtggaaaatgtcagagatgacttcaga
ggtcccgaattccgttgcggaaaatctggcaatctgaagagagctttttctaggagacgt
ggaggtggtgaacacttggagattgttagctgtacagcctgtggccagcaagtgaaccac
ttccagagggactccttctatcagcatccagtactcaaagtacttatttgcaagtcttgt
ttcaagtattactcaagtgatgacatcagcaaggattgtgatggcatggatgaacagtgc
agatggtgtgcagaggggggaaacctgatctgctgcgacttttgccccaatgccttctgt
aagaaatgcattttgcggaacctggggcgaaaagagttgtctggcatcctggatgaggag
agtaagtggtactgctacgtatgcagcccagagcctcttctggacttggtcgtcgcttgt
gacaacgtccttgacaacttggggcatttgtggccagagcaccgcaagaggggcagaggc
gagggaaaatctggacattatgactcccatccaaggcattctcaaaacattcccgtgggt
cattggaaccatggtggcatggatggtcacgttgtgttcaactacaacacccttcaaatt
ccagaggagatggcgaaaaaggctaaaaacctggtggactctacaaacaccgtaaacaca
acttttgtgaagtttattcaaggtggcatgcagcagaaacagacaaccgagttaaaacta
caatacctgaagactttccagtcagtactgaagggtctgaagaagtctcagacagctctg
gaggaagcccttttggaggagttcagagagatgggtttgccaaatggtggcgaaaacccc
acgtttgaggatactgatgtacctcaacaagaacaagagggttgtgtggaaattgacatt
tctgataagaatggccttcattacttaaagaaaattgcagctgaacatttggaagagaat
gattcagactcaaatggctttatggatgatggaaggccttcgtcctcaattgaaatgaaa
ggtgtccttggcacagagataattccccgacgaggtagaggcaggccgcggaaaaactca
aagcctggagaagatgcttgcaacgtgacaaaacaactggtggtgcaaatttcacctgcc
cctgttgaacaagagccactctctggccccccagagttggaggtggaagtggagttggag
gcagaggaggaagagagaaaagaaaaagtggaggaacgggagggagactgtgaatctatt
gaacttgtaacagagggggagtatgaatctgctgaaggaagcgaatctctggaactggaa
gaggagccagataatagacgctcacctcgggtaaagaccacacccttgcgcaggccaggt
gagggcaagatccagccgaccccctcgggcgcggacagtgagagtgattcggaccctgac
accagccccaatgctgaagtgcctcaaggagctgacgagggagggcttgggagaggaact
gatgactctgactccgatgaggtcccagctgtcctccagcgggccgccatgacgcgcagt
tcagacgaagccgagagtgacgatggagaccatcggagtgtgaccaagaaatgcctcttc
ggcctgaagaagaacacacccctctctccagaaagagttgtccgcaaacgcaaggtgcca
gaccgctcctctgactctgattcctccagtgacgatccggacctgcagaaggagatcaag
actatgaccaggcccagggggaggcctcggaaggttaagagagaggatgaacctaccccc
agcaaggatagtccgcaacataggcccaggggcagacctcggaaggtcaagaaagaggat
gaatctacatccagcaaagagggtaatacccaggcagccaagcctcaaagcacacctcaa
tctgagcatagaacgaagcagacgccatcctcttccagtcaagaagagggggacctggac
tctgagtctagcgatgacagtggtgaccagaagatcaagcctatcactgaggaggtggcc
ttactgggggcagcagctttccaccagtcatccggcgatgaagagcagccccagtctggg
ccttcttgggcagcagaagatgatgacgatccagaaaatagaatcgctaagaaaatgctc
ttggcccaaatcaaagccaactactcatcgggggaggatttctcttcagatgtggagtca
tcacatgatgatgagtctgacagggaagagaaggagcaagaagatgtgaaagatgaaagc
tccgatgagaatggggagacttccagtttgacctctgactctgagtccagtaaaacatgt
cacagacatcgtctgctacgccacaagctcagccttgacaatggaaatccaagtgatcag
aaaaccgctgaagaagatgggattgagcagaaagtcaggaagtctagaagaaccaaaggt
gagaaattggataaccagagtagtgatgatgatagccaatcacagcaggaagagtctggt
atgagtgaagagctgagccaatcggagaacgagggcaatgaacagatgctcaaaagctct
acatcatcttcctctagagtcgagagggaatcagtccgtagttatctacagaagaagcag
caacccccatatattgtgctgtctgactccagtgtcgataagagtgacgatgaagagaag
gacggcgaggaaggggacaacaaagatacacctaagggccgcaagaagatccgcaggatc
atcgtagacgagcacctccgctcggagacccagagagccctgaaggaggaggaggagaga
cgcagacgcctggcagaaagagagcagagggaggacttcagagaggtgattgttattgag
gatgaggcgtctcatgtggcctgtcccatcaccactaagctggtcctggatcaggatgag
gggacaaaggagccactcatccaggtgcacaggaacctggtgaccaggctcaagcctcac
caggtggatggtgtgcagtttatctgggactgttgttgtgagtctgtgaagaaggccaat
tcaacccctggatcaggctgcttactggcccactgcatgggcctagggaagacactgcag
gtggtgacatttctccatacgatgctgcagtcaaagtgcatgaacttcaggactgccctg
gtggtgtgtccactcaacaccatcctcaactgggtcaatgagtttgagaagtggcaagtt
gacatgggagctgacaaagtcaaggtgacagagttggccacactgaagcgaccacaggag
cgttatattgccctgcagagatggcagatggatggaggtgttatgattatgggctatgag
atgtaccgtaacctcacactaggcctcaaagtcatccacggaaaattcaaaaagaccttt
gacagtactctagtcgatccaggtccagactttgtgatctgcgatgagggtcacatcctg
aagaacgaggcatccaacatctctaaagctatgagtgccattaagaccaaacggagggtg
gtgctgacaggcacaccactgcagaacaacctcaatgagtaccactgcatggtcaacttc
atcaaggaaaaccttctgggctcaatcaaggagttccggaattgctttatcaaccccatt
caaaacggccagtgtgcagactccacccccagagacgtccgcatcatgaagaatcgcgcc
catgtccttcatgcaatgttggcagggtgtgtacagagaagagactactcagccttgacc
aagttcctgcccccaaaacatgaatatgttatggcagtgagggtgacccctcttcagtac
agactgtattgctactacctggacaacttcactggagctaggtctgtggttgagggagcc
aggggcaaagccggaaccagccttttcaaggacttccagatactcagccgaatctggaac
catccctggtgtctgcagctcaactatatcagcaaagaaaataagggccattttgatggg
aagcaccaggggaaaactgagaggaaagagaaggagaacaaggggaaagtggtgaatgct
gatgaagacagcaaggatgtggaggtgatccttgtgtggaacagcacatcaaagggtgtc
gatgtggaaggagaccagcgagcaggtccactggtcccagtggtaaaagcgttgagagcg
tccaccagtttcaggcctgacagtccggctgcagactggtacaagtcaatgctgagtgac
tctgacgccaccatcctgggacactcagggaagatggtgctgctgtttgagattctccaa
atggcagaggaactggaagacaaagtgttggtgttcagtcaatccttgatcacattagac
atgattgaagatttcttggacctcaccaacaaagccaaaaacaacaggcaatcatcccta
tacaaaggtgatggcagctggatcagaaacactgactattaccgtattgacgggtccacc
agcgccacatccaggatgaaatgggtgcaagatttcaatgatgccaccaacgagcggggt
cgtctgtttctcatctcgacaagagctgggtcccttgggatcaacctggtagcagctaac
agggtcataatttttgacgcttcgtggaatccctcctatgacatccagagcatcttcagg
gtgtaccgttttggccagctgaaggctgtgtttgtctaccgcttcttggctcagggcacc
atggaggaaaagatctacgaccggcaggtggccaagcaatcactgtcgttccgggtggtg
gaccagcagcagatacagagacacttcacactgtttgaactgacggagctctacatgttt
gagccagacctgctggatgaccccaactctgagaagaagagcaagaggaccacaccgctg
ctgcccaaggacatggtgctggcagagctgctgcagagctgtaaggggcagattgtctgc
taccatgaacacgagtccctgctggaccacaaagaggaggaggagctcagtgaggctgac
tgcaaaactgcctgggctgagtacgaggcagagggtgctttattcttgaacaaggcagaa
cacagcaacaccaatgttcccagcccctccacctccactatggctgtcagtctgtcatcc
ctgtacaagaaaactaatgggcagctgaagaacatgatttattctagctgtgagaaggtc
aacgaggccatcaagtccctgcattccttactgaacctctccctggatgactatgtgttg
cgcttgtggcaagataacccaagtctagatgagaagcaggtgagagctgtggcccagacc
tggaaaaccagcaatgacaaggagcgggagcgacgacaggccatacatcgcgaccttctc
gcaaaacaacaatcacttacaatgtacatccagaccattttggccagtagaaaaaacgaa
attacccatactgccacggtcaccaatcgcacaccagctctgacagattccgccaataaa
cctacacagtga
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