Salvelinus fontinalis (brook trout): 129816110
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Entry
129816110 CDS
T11136
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129816110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129816110
03021 Transcription machinery [BR:
sfon03021
]
129816110
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129816110
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129816110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
DUF3839
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129816110
NCBI-ProteinID:
XP_055726229
LinkDB
All DBs
Position
19:complement(891271..919841)
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AA seq
764 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESQSGDGNTGVQTNGLDFQRQTVQATNAIT
NAHAQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPVQQQMFLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPVQITSIPSVSTHLPGQLSQLGY
PYEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQTPQGQQNMYTA
QSFLQAQNLLTQLPQSQANLLQTQPSINLASQPATPSHTIAATPIQTLSHSQQTPPKRLD
TPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS
FKNMCKLKPLLEKWLNDAVCAENLSSDLALSSPCGLGSPGLGMEGLNRRRKKRTSIETNI
RVALEKSFLEQNQKPTSEEITIIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGHSITGT
GSTPIKTIFTPTSPLVASTASLVTSNTPTTLTLNPVMPLTSTSVSGLTLTGTTIGATTNT
ASVISTAPMVTAVTSSTSLSPSPMALQATAAETGGTQEHTVVTQAPSSLATNLGTGQVMV
AGPGLSAALQGAAQLPTSSSYAAMAGLNPGLMASSQFTPGGALLSLAPGGLGGAINPAML
SNSTLATIQGLWSALASGGTLPITSLDGSGNLLFANTSAGSTPNLVQPLFLNPQNLSLLT
SNPVSLVSAGAAGGGALQVTANHQVTTATVPVPASTITTASKAQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcagaaactagtaaatgtgctatggagagtcagagtggggacggaaacacagga
gtccaaacgaatggactggactttcagaggcagacggtgcaggccacaaacgcaatcacc
aatgcacacgcacaagctctgctccaacagtccaagtctgaagactcgggtgcaattccg
acctccgtccagcagggggtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagtgcagcagcagatgtttttgcagcaggcccaggcccag
ctcttggcagcagccatgcagcagcaatcagccagccagcagagcagcaccacgggggcc
agcatctctgcctccgcagccacccccatcacacagctgcccctgtcccagcccgtccag
atcacctctattccctctgtctctactcatctcccaggccagctaagccagctgggatac
ccgtatgagatggcgaccttcagcagttacctacctcagttacagcagctgcagcagcag
aacctaaccatgccccagtttgtcctggttcaacctggccaccacatcgccacccagctg
caacctggccaattcatcatctcacagacgccgcagggccagcagaatatgtacacagcg
cagagtttcctgcaagcccagaatcttctaactcaactacctcaaagccaagccaacctc
ctgcagactcagccaagcattaaccttgcctcacagccagcgactccgtcccacacgata
gcagccacgcccatccagaccctgtcccacagtcagcagaccccgcccaaacgcctggac
acacccagtctggaggagcccagcgacctggaggagctggaacagttcgctaagactttc
aaacagagacgcatcaaactgggcttcacacagggggatgttggcctggcaatgggcaag
ctgtatggtaacgacttcagccagaccaccatctcccgctttgaggccttgaacctcagc
tttaagaacatgtgcaagctgaagccacttctggagaagtggctcaacgatgcagtttgt
gcagagaatctgtcgtctgacctggccctgtccagcccttgcggcctgggctcccccggt
ctgggcatggaggggctcaaccgccgacgcaagaagaggaccagcatcgagaccaacatc
cgcgtggccttagaaaagagctttctggagcagaaccaaaaacctacctctgaggagatc
accataattgctgaccagctcaacatggagaaggaggtgatccgggtgtggttctgtaac
cgtcggcaaaaagagaagcggatcaacccccccagcagcggacacagcatcacagggaca
ggcagcacccccatcaaaaccatcttcacccccactagccccttggtggccagtacggcg
agccttgtgaccagtaacacaccaaccacactcactttaaacccagtgatgcctctcacc
agcaccagcgtctccggcctgaccttgacaggcacgacgatcggagcgaccacaaacacg
gcatctgtcatctctacggcacccatggttaccgcggtgaccagctccacctcgctaagc
ccctcccccatggccctccaggccacggcggcggagacgggtggaacccaggagcacacg
gtggtcacgcaggcgccatcgtccctagcaaccaatctggggacaggtcaggtgatggtg
gctggaccggggctgtcagcggccctgcaaggcgctgcccagttacccaccagttctagt
tacgccgccatggctgggcttaacccaggattgatggcatcctcgcagttcactcctggg
ggggccttgctgagcttagctccgggtgggcttggaggggctataaaccccgccatgttg
agcaacagcaccctggccaccatccaaggtctatggagcgctctggcatcgggtggcact
ctccccatcacctcgctggacgggagtggtaacctgctgttcgctaacacctcggctggc
agcactcccaacctggtgcaaccccttttcctgaacccccagaacctgtccctgctcacc
agcaaccccgtcagcctggtgtcggccggagccgccgggggaggggccctgcaggtcaca
gccaaccaccaggtcaccacggcgaccgtcccagtgcccgcctccaccatcaccactgcc
tccaaggcccagtga
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