Salvelinus fontinalis (brook trout): 129816177
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Entry
129816177 CDS
T11136
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecules
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129816177
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129816177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129816177
04090 CD molecules [BR:
sfon04090
]
129816177
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
Nectin family
129816177
CD molecules [BR:
sfon04090
]
Proteins
129816177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
129816177
NCBI-ProteinID:
XP_055726394
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Position
2:complement(30090063..30163431)
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AA seq
566 aa
AA seq
DB search
MFLPCLGNYPLHKRQHAVFIFLLYSLTGVGGSQVLVPQKVSAVLGKNVTLGCSVEVEANL
SLTQSSWERRLPTGSVTVAVYNPVFGISIPPDYVRRLSFRSPSSHDATIILEDVGFADIG
VYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAERALPPAEV
SWETDLFGHSEVTLQDEANGTTSTQVHYLWQPTRHVQGHALTCVVRHPALHTDFRIPYQL
NVEYAPDIVVVGYDGDWHVGRESVQLTCKAKANPPAHHFRWIRLDGDMPEGVETLNSTLL
FLRPLQRNDSGVYRCEVANAINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGSASSSTSVG
DKQRVLFTSPTLAALPPANQLGTIVGGAVGGALFLLLLLVLGGVCYLRQRQTFHGDYYTK
QYLGPSDMQKAPPQHELHPSKPANNVFVDKDREEWGDRERNHERDRERLHLHPTSTTIMN
SHNHREPERQPNGRTRAMRNGEHHDHDHLRSYPSPHQTSHARYAAPPHPLSNGSPYLSDD
CYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccttgcctcgggaattacccgcttcataagagacagcatgctgtatttatt
tttcttctgtacagcttgacaggtgtggggggcagtcaggtgttggtgccccagaaggtg
agtgctgtattggggaagaacgtgacgttgggctgtagcgtggaggtggaggccaacctg
agtcttacccagagttcctgggagcgccggctgcccacaggctcggtgacggtggcggtg
tacaaccccgtgttcggtatctccatccccccggactacgttcgccgcctgtccttccgc
tcaccctcctctcatgacgccaccatcatactggaggacgtgggcttcgccgacattgga
gtgtacacctgcaaggtggccaccttccccctgggcaacacacaggcctccaccactgtt
agcgtgctcgtggagcccaaggtgtatgtgtcggctggctcggtggctctgatcgatgag
ggcaatgagacggtggtggctacctgcatcgctgagcgagccctcccccctgccgaagtt
tcctgggagacggacctgtttggccattcagaggtgacactgcaggacgaggccaacggc
accaccagcacccaggtgcactacctgtggcagcccacccgccacgtccagggtcacgcc
ctcacctgtgtggtgcgccatcctgccctgcacacagactttaggatcccctaccagctc
aacgtggagtatgccccagacattgtggtggtaggttatgatggtgactggcacgtgggc
cgcgagagcgtccagctgacctgcaaagccaaggcaaacccaccagcccaccacttcaga
tggatcagactggacggggacatgccagagggggtggagacactgaacagcacattgctg
tttctgaggcccctccaaaggaatgactctggagtctacaggtgtgaggttgccaatgcc
atcaacctacgcagcagggacctacggatacgcatacaagatcctcccaccacctccatg
ccctccaccacccctgcgcctgtcctaactggctctgcctcctcctccacctctgtggga
gacaagcaacgggtcctcttcacctcccccaccctggcagccctgccccctgccaaccaa
ctgggcaccattgtgggtggagctgtgggcggcgccttgttcctcctgctgctgctagtg
ctgggcggggtctgttacctcagacaacgacagaccttccacggggactactacactaag
cagtacctagggccttcagacatgcagaaggctcctccacagcacgagctccacccctcc
aagcctgccaataatgtttttgtagacaaggaccgcgaggagtggggtgaccgcgaacgc
aaccacgagcgggaccgcgagcgcctccacctgcatccaacatcaacaaccatcatgaac
agccacaaccacagagagccagagcgccagcccaatggccgcacgagggcgatgagaaat
ggagaacaccatgaccacgaccacctgcgtagctaccccagcccccaccagactagccat
gccagatacgctgccccaccacacccgctgagcaacggctccccctacttgtcggatgac
tgctatgacagtggggccgagggggactatgtctctcatatggacggctcagtgatctca
cgcagggagtggtacgtctga
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