Salvelinus fontinalis (brook trout): 129816207
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Entry
129816207 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129816207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129816207
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129816207
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129816207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
Ig_DSCAM-DSCAML_C
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
SH3_9
Motif
Other DBs
NCBI-GeneID:
129816207
NCBI-ProteinID:
XP_055726417
LinkDB
All DBs
Position
19:4590937..4663694
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPNEPVQSISAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAALDSKAMTSPSERVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPMPDCHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPDYYLSERSEQEEAYQ
VISTQALDSNLSNLIKRNNELETLMGKLIQTCQHVECNASRQENKLLEECDLLIDIIQQR
RQMIATKIKEGKAIRLRKLAQQIASCKQIIERSSSLITQADHTLKETDHARFLQTAKSIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLENLDYLTAPNPPIIRAELCMASN
DTITVHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYMFIVKAINQAGSRSSEPWKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETLSKKS
HTQDRFTSQGSYGVTANVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDIAFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCRD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggaccca
ctgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgcatcctagtctcc
cactgcacccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgtcatcaccctcagccagaggggcctagaaggactgaagcgtaacgtcactctgcag
aacatcattgaccgctttcagaaggcttccgtgagcgggcccaactcccccagtgagact
cgccgcgagcgggccgccctagacagcaaggccatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaggaccctccccaagacgccgtcaagacctgtgtcacctgcgag
gtgtcctactgcgacgagtgcctgaaggccacccaccccaataagaagcccttcactggc
caccgtctgatcgagcccatgccggactgccacctcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagcagcactcagcgaccgctacgagaaa
ctgaagagaactccagactactatctcagtgagaggagtgaacaggaggaagcataccag
gtgatatctacgcaagccttggactctaacctcagcaatctaatcaagaggaacaatgag
ttggaaactctgatgggcaagttgattcagacttgccaacatgtggagtgtaatgcatca
agacaagagaacaagctccttgaagaatgtgacctcctgatcgacatcatacagcagaga
agacagatgatagccaccaagataaaggagggcaaggctatacggctgcgaaagctagcc
cagcagatcgccagctgtaagcagatcattgagagatcgtcgtccctcatcactcaggct
gatcacaccctcaaggagacagaccatgcccgctttctgcaaacagccaaaagcatctgt
gaaagagtgtccatggcaacagcatcctctcagatcctgataccagagatcaacctaaat
gacacctttgatacgtttgcgttggacttcacaagggaaaagaaaatgctggaaaacttg
gattaccttacagcaccaaatcccccaataatccgggcggaattatgtatggcatcgaac
gacaccatcactgttcactggacgtctgatgacgagttctgtgtggtctcctatgagctt
cagtatgccatcttcaccggacaagccaatgttgtcagtttgtgtaactcggctgatagc
tggatgattgtgcccaacatcaagcagaatcactacacggtgcatggactccagtgtggt
accaagtacatgttcatcgtcaaggccatcaatcaggcagggagtcgcagcagtgagcct
tggaaactcaagaccaacagtcaaccattcaagttggacccaaagtctgctcacaagaag
ctgaaggtctcccatgacaacctgacagtggagcgagacgagacgttgtccaagaagagc
cacactcaggaccgcttcaccagccagggcagctacggcgtcacagcgaacgtgtacatc
gacagcgggcgccactactgggaagccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacatgagtggattggcaagaactctgcctcgtgggta
ctttctcgctgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgaa
ccgtccccccacctgcgtcgtgtgggggtgttgctggactacgatgctggctccctggcc
ttctacgatggcgccggctcacagcacctgtacacgttcgacatcgccttcgctcagcca
gtctgtcccgtgttcaacgtgtggaacaagtgtctgactgtcctcacagggctgcccata
ccagaccacctagagggaacagactgccgggattaa
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