Salvelinus fontinalis (brook trout): 129816228
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Entry
129816228 CDS
T11136
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129816228
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129816228
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Alpha_GJ
Motif
Other DBs
NCBI-GeneID:
129816228
NCBI-ProteinID:
XP_055726436
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All DBs
Position
19:complement(4757946..4762678)
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AA seq
975 aa
AA seq
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MMCGILTGWHGWFFGLQMLCFSLAESEGNPLKYQTNEEGSPGTVIGNLAKDMSLSPSFGS
NTNFRMMKQFNDSFIRVRESDGELSVGERIDRERICRHTLQCLITFDVVSFSKERYKLIH
VEVEVKDINDNSPEFPNKESTVEISENADVGFRIHLDPAEDADIGSNYIQSYQISVNSHF
SIDVLLRADGVKYAELVLMKELDRETQSSYAVELIATDGGNPYRSGSTKITIKVTDFNDN
RPVFDQNNFSVTLPENAQVGFVLLDLNAVDPDEGLNGEVGYGFGKQVSAEIRELFEVDSK
SGRVRLKNPVDFETKKTYELDVQATDLGSNPTPAVCKIIIHIKDVNDNAPEISITPMTSI
STGIAYISETADKDSLVALISTSDRDSGVNSQVHCTLYGHDHFKLQQAYEDSYMIVTAAF
LDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKPIYEVSVVENNAPGA
YITTVEARDADLGTNGKITYRLLDSVIMGSPVNTFVSINAISGSIYALRSFNYEVMKHLE
VHIQASDEGSPQLQSSAIIILKILDQNDNAPSIIEPILIKGSAEIFLPKDAPAGYVVTQI
KATDAEEGINAQMSYKITEGGHLGFSINKVTGKLHVTHELNYDLSETLRVLVAVNDNGTP
SLTSTATIHLTLIEGTPPSVPAMVQNDSVEVFEWDIAIIIVLSGSCSLLLLAIILITTTC
SRRKREKREAGYSENEDMPHVEKGESRQIDSLITNHKSNVFDVHPFPEKAPLASSNTIKT
APDDGRQEKECVFDNRIMEGKLEGYSTLPGYRKETLRPITIWKGNSFTTISARDPQFSGK
DSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTSECKILGHSDRCWSPSATRANTSLS
HGPHLSTFSKTASLPRNTLQRDAYYQQAHLPKINGLQSVYEKVQHQELDYILVCPPTPAR
ILETDEISLPEYGQS
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtggcattttaacaggttggcatgggtggttttttggattacaaatgttatgt
ttttcactggctgagtctgagggaaatcctctgaaataccagaccaatgaggagggaagt
ccaggaacagtgatcggtaacctggccaaggacatgtccttgagtccctcttttggctcc
aatactaatttcaggatgatgaaacaattcaacgattcttttatccgggtgagagaaagc
gacggggagctttctgttggggagaggattgacagagagagaatctgcaggcacacttta
cagtgtctcatcacttttgatgttgtcagtttttcaaaagagaggtacaaattgatccat
gtcgaggtggaggtaaaagacatcaatgataactctccggagtttccaaacaaggaatct
acagttgagatctctgaaaatgccgatgtggggttccgtattcatttggacccagccgag
gacgcagatatcggttcaaactacatccaaagctatcaaatttctgtcaacagtcatttt
tcaattgatgtgcttttgagagcagatggggttaaatatgcggagttggtgctaatgaaa
gagctagacagagagactcagtcatcttatgcggtggagcttattgccacagacggagga
aacccttataggtcgggttcaacgaaaataacaattaaagtgacagactttaatgacaac
cgtcctgtttttgaccagaataatttctctgtaactttgcctgagaacgcacaggttgga
ttcgttttattggacttaaatgcagttgatccagatgagggtttaaatggagaggtgggc
tatgggttcggaaaacaggtttctgcagaaatcagagaacttttcgaagtcgacagtaaa
tccgggcgcgtgaggcttaagaacccagtggattttgagaccaagaaaacatatgaatta
gacgtgcaggcgactgatctaggatctaacccgacccccgccgtctgtaaaataataatt
catatcaaagacgttaatgacaatgccccagaaatcagtattacgccaatgacctccatc
tcaacaggcatcgcatatatcagcgagacagcagacaaggacagcctagtggcgctgatc
agcacctcggacagggactcgggcgtcaatagccaggtccactgcactttatatgggcac
gatcatttcaaacttcaacaggcttatgaggacagctacatgattgtcaccgcagcattc
ctagacagggagaagattagtgagtacaatttaacagtgatggctgaagattttgggtca
cctccattgagaaaaatcacacaatacaccatcaggctaagcgacgagaatgacaacgcc
ccacactttactaagcctatctatgaagtttctgtggtggaaaataatgcaccaggggca
tatataaccacggttgaagccagagatgcagacttgggaactaatggcaaaattacatac
agacttttagacagtgttataatgggatcacctgtcaacacgtttgtatctataaatgca
atctctggttcaatatatgcactgagaagcttcaactatgaagtcatgaaacatctggag
gtacacatccaggcaagcgatgaggggtcaccccagcttcagagcagtgccatcatcatt
ctaaaaatattggatcagaatgacaacgctccgtctatcatagagcccatccttattaag
ggatcagctgagattttcctgcccaaagacgcacctgcaggttatgttgtcacccagata
aaggccacggatgctgaagaaggcattaacgcgcagatgtcctacaaaatcactgagggg
ggacacttgggtttctctatcaataaggttactgggaagttacatgtgactcatgagctg
aactatgatctgtctgaaacactgagagtcctagtggctgtcaatgacaatgggacacct
tctctgacctccacagccactatacatctcactctcattgaaggcactcctcccagtgtt
cctgctatggtccaaaacgacagtgtggaggtctttgaatgggacatagccattatcata
gtcctatcagggagctgctccctcctcttgctagccatcatcttaatcactaccacctgc
agtcgacgcaaacgggagaagagagaggcgggatacagtgaaaatgaagacatgccacat
gtggagaagggggagagcagacaaattgattcattgatcaccaaccacaaaagcaatgtg
tttgatgtgcacccttttcctgagaaagcaccgttggcctcaagcaacacaataaaaaca
gcccctgacgatggaagacaagaaaaagagtgtgtctttgacaacagaataatggagggt
aaattggagggttattcgacactgcctggctataggaaagaaactctcagacccataacc
atatggaagggtaattcattcacaaccatctctgcgagagatcctcagttcagtggaaag
gacagtgggaaaggagacagtgactttaacgacagcgattctgacatcagtggagatggc
cacaaaaaagactctccaccgataaacagtctctgggcctgcaccagtgagtgtaaaatc
ctaggccactcagaccgatgctggagcccctctgccactagagccaatactagcctctcc
catggaccacacctctcaaccttctccaagacagcctctctgccgcgaaacactctgcaa
agagacgcctactaccaacaggctcacctacccaaaatcaatggtctgcaaagtgtctat
gaaaaagtccagcaccaagaattggattatattctggtttgtccaccaacaccagccagg
atactagagactgatgagatatccctcccagagtatggacagtcctaa
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