Salvelinus fontinalis (brook trout): 129816240
Help
Entry
129816240 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129816240
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129816240
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129816240
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129816240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
129816240
NCBI-ProteinID:
XP_055726458
LinkDB
All DBs
Position
19:5094774..5131275
Genome browser
AA seq
1017 aa
AA seq
DB search
MAPIQQESEIQFAQRLASNEKPMRTKAIKKLRKYISVRSQKINGGFTGDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLMHNFQNVQSMFLFLETFLQTIKREWTGIDRLRMDKFFQL
VRFVFRNSFEMMKRKEWETSVVTRFLELLTAQVLHSTSGDPCGLQFHILDLYMTELAAVG
SAELTAAQNLTFIDPFCKTASKTKDRILLKAICGSIFSAIVDQAPFAIEDLLKEVNATGG
GSEESDSGQASEEEEEKKEPPKGKKAAKKSTMKTIGKQTNCTASTEEDEGSLEEGIGPVL
QFDYSALADRLFGLASRSNTPSHNRQRLYKVIKTLRDLSDGVFPQDEYPEEVSTDEDDDE
MFGSRKRMNRGTALEEEESSPAKKCKGKKNDSKPGKSGQRAASDKSKPAKTPGDTTTRKK
RSMGEVKSGEQNRVAEESEVKAEADTTPPTTESKTTDAKKAAPTEAKTELSAPIDSVEAR
VKKKTSTPAERTDVGEKQEAVLEEDASPMKVTDTPSEVTAMETEVQSETPQDIVVGSLSS
VMEIGQKTHCETPVPDSTKTKKSKTPVQEEEKAVAEPETNTDVPEASVKATETEDQAAPA
THDGEAAEGATEPESVPETATTSTTKRKGRRRSTKQDPEEQTTVEEVETKPDAVXEIMDT
PLKKNRRKKAEWSAESTKEEVAETDSAPVDTTPAGPKPLATPAEEPPADVRIATTSLKKK
KLKAAKSEEESVEVEGEMQPETEADVLLVAAETVPAEVATPTVLKKKMAEEQSVGAEVKT
KTAADSNRTLVDAEAELVEVSTPAPLKKKKKKAALVSEEQEPDITAVEESIAEEQPTKVD
LETPVKKRKIPVVIEVEAEELEAEAEAARVNDSEEPSTPVNAKKTKKMMPKKGKGGEESD
FITFQSHATIPTPIFFNRAKGSPSTSLSSKKKCPTPESESKKVTFGLNKNRTAEFRKTDR
SLLVSPEGSSRVPFDPQQKPLFGVLXSPVASLTNSTKKKTKSTPKATPKRPTAADFF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatacaacaagaatcagagatccagttcgctcaaagattggcatctaacgag
aagcccatgcggacaaaggccatcaagaagctaagaaagtatatcagtgttaggtcacag
aaaatcaacggtggtttcacaggcgacgaattacttaaactatggaagggcctcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagttgtcgaatcagatatctggc
ctgatgcataactttcagaacgtccagagtatgtttttgtttctggagactttcctgcag
accatcaaaagagaatggactggcattgacaggcttcgcatggataagtttttccagctg
gttcgtttcgtgttcaggaactcttttgaaatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttttggagctcctgactgctcaggtcctccatagcaccagcggagac
ccttgtgggttgcagtttcacatactggacctctacatgacagagctggctgcagttggc
tcagctgagctcacagcggctcagaacctgacgtttatcgacccgttctgcaaaacagca
tccaaaaccaaagatcggatcctgctcaaggctatttgcggcagcatcttcagtgccatc
gtggaccaggctcccttcgccattgaagacctgctgaaggaggtgaatgctacaggtgga
gggtctgaggagtctgactcgggacaggcttctgaagaggaggaagagaaaaaggagcct
cccaagggcaaaaaagctgctaagaaatccaccatgaaaaccattggaaagcagaccaac
tgcaccgcatcaactgaggaagatgaaggtagtctggaggaggggatcggacctgttctc
caatttgactactctgccctggcggacaggctgtttgggctagccagccgtagcaacacc
cccagccacaacagacagagactctacaaagtcatcaagactctccgggacctcagtgac
ggagtcttcccacaggacgagtacccagaggaagtgtcaacggatgaggatgacgatgaa
atgtttggcagcagaaagaggatgaataggggaacagccctggaggaggaagagagttca
ccagccaagaaatgtaaaggcaagaaaaacgactcaaaaccagggaagtcaggccagcgt
gcagcatcggacaagagcaaaccagcaaagacacccggtgacaccaccacgcggaagaag
aggagcatgggagaagtgaagagtggcgagcagaaccgggtggcggaggagtcggaagtg
aaggctgaggcggacacaactcctcctacaacagagagcaaaacgacagacgctaagaag
gcagcacctacagaagcaaagactgagctctctgccccaatagactctgtagaggcgagg
gtaaagaagaaaacatctaccccagccgagcgcaccgatgttggggagaagcaagaggct
gtcctggaggaggacgcctctcctatgaaggtcactgatactccctcagaggtaactgcc
atggagacagaggtccaatcagaaactccacaggatatagtggtggggagcctatcatct
gtcatggagattggacagaagacccattgcgagacaccagtaccagacagcacgaagacc
aagaagtctaaaacgcctgtacaggaggaggagaaagcggtagcagaaccagagactaat
acagatgtgccggaggctagtgtgaaagccacggagacagaagaccaggctgctccagct
acccatgacggagaggctgcagagggggctacagagccagagagcgtccctgagactgct
actaccagcacaaccaagaggaagggcaggaggaggagcaccaagcaggaccctgaggaa
cagacaaccgtagaggaggttgagacgaagccagatgctgtataagagatcatggacacc
ccacttaagaagaataggaggaagaaggctgaatggagtgctgagagcacaaaggaagag
gtcgctgaaacagactcagcaccggttgacacgacaccagcaggccctaaaccactggcc
actccagctgaggagcctccagctgacgtccgcatcgccaccacttccctgaaaaagaag
aaacttaaggcggccaagtctgaagaggagagtgtggaggttgagggtgaaatgcagcca
gaaactgaagcggacgtcctacttgtagccgctgagacggtgccagcagaagtcgctaca
ccaaccgtgctcaaaaagaagatggctgaagaacagagcgtgggggccgaggttaaaaca
aagactgcggcagactcaaaccgtacacttgtagacgctgaggcggagctggtagaggtt
tccacaccagctcccctcaagaagaagaaaaagaaggcagcactggtatctgaggagcag
gagccagacatcacggcagtggaggagagcattgcagaggagcagcccacaaaggttgac
ctggagactcccgtgaagaagaggaagatcccggtagtgatagaggtcgaggctgaggag
ctggaggctgaggcagaggctgctagagtcaacgacagcgaagagccatccacaccggtg
aacgccaagaaaacaaaaaagatgatgcccaagaagggtaagggaggggaggagtctgac
ttcattacgttccagagccatgccaccatccctacacccatcttcttcaatagagccaag
ggaagccccagcacatcgttgtccagcaagaagaagtgtccgactccagaatctgaatcc
aagaaggttaccttcggacttaacaaaaacagaactgcagaatttaggaagaccgatcgc
agcctgctggtgagtccagaggggtcgtccagagtgccatttgacccccagcagaaaccc
ctgttcggagtgctgnngtccccagtggcctctcttaccaacagcaccaagaagaagacc
aagagcaccccgaaagccacccccaaacgccctaccgctgctgactttttctag
DBGET
integrated database retrieval system
