Salvelinus fontinalis (brook trout): 129816259
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Entry
129816259 CDS
T11136
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129816259 (stxbp5l)
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129816259 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129816259 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
PEP5_VPS11_N
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129816259
NCBI-ProteinID:
XP_055726486
LinkDB
All DBs
Position
19:complement(6580806..6822020)
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AA seq
1264 aa
AA seq
DB search
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTAHAPTPQDIHVQETLVSENFHICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDT
PYSNEVQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDII
PILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQML
YKLKTSKVFEKPKVGEGRAGELVEEDPYAVQMVSWCPHSRLFCVVGISAHVILYRFSKHD
ANTQIVSLEVRLQFDSEDVISPSEAENNPCFSDPSSHSPQPPGSPGSGTQDSLPCLKVKN
RPVRMPPGYQAELVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILM
CMGTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDN
QVSMDMERSKSPTSVPYPSSLHYDPRSMPEPVASLRASHCSPVFYLLDNVKGPGRKLSLP
TDLKTDLDHVNGHCTSPTSQPCSVGKPRITGVPEGPRLTRRGPGRPPFRKAQSAACMEIS
LPVSSHTEGGYASRRAMLQQLHGVSMYSHDEHHTTSYNWSERAESRENSFSRSRSSSVSS
IDRDTKESVTTLQFGESYGRKGDALPTACLWVGTSLGVVLLLPISIPTEEEERMEEPITM
GPSGTVLMLKGSVLRFAFLDCGGALIQSPYEVWRDPNGPEDPDRPRRRKLVNFSPSSSQE
ACSDGHLAVVCSEKQAKVILMPTQAVLFTHNITESSFLLRADVVSVCNSVCLACFCANGH
IMTLSLPSLRPLMDINYLPLTDLRIARTFVFTNGGQALYLSSPTEIQRLTYSQEMTDNLQ
DMLGELFTPIETPEAQNKGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGPMGL
ENMKTAAGGVVGDLARARIALDQRGERLGELEERTALMMNSAETFSTHAHQVMLKQKDKK
WYQL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgtcgcg
tccccgtcgtgcggcagtgcagctggtactccgaccgctcatgcgcccactccccaggat
atccatgtccaggagacgctagtctcggaaaactttcacatatgcaagacggtgcgccat
ggcttcccgtaccagcccacctgcctggccttcgatcctgtccagaagatcctggccatc
ggctccagaacaggaggcatacggatcctgggacgtcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagacgacacgctacatctgtggaaccttcgccagagacgcccagccatc
ctgcactcgcttaaattcaacagggagaggatcactttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaattagcaactaaagcacat
ccagggcccgtggtccatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccagtgggacctccgagccaagaaggttgacttcagaatc
tactacgatgaggctatccattctgttagctggcatcatgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcaa
atcacctaccctcacgggaagatactgaaggacgggaggaaagagtcgtgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagcagtgagccctatgtcatcttctctgga
ggtctgtcgtatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaag
gccatcacagtgctggagatggaccaccctattgtagagttcctagtactctgtgacacc
ccatactccaacgaggtccaggatccttatgcagtggttgtgcttttagaaaaggacttc
atcgtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggac
atccacgagtctcctgtcacctgtacggcttacttcgctgaatgccctcctgacatcatc
cccatcctctactccataggggccaagcagaagaagactggctacagccacaaggagtgg
ccagtgagcggtggcacatggacactaggctcacagacctacccagagatcatcgtcaca
ggacacgcagacggaaccgtaaagttttgggacgcctctgctattacactgcagatgctg
tacaagctgaagacgtccaaggtgtttgagaagcccaaggtgggagagggtcgggcgggc
gagctggtagaggaggacccctacgccgttcagatggttagctggtgcccacatagccgt
ctcttctgtgtggtgggcatttctgcccatgtcatcctctaccgcttcagcaaacatgat
gccaacacacagatagtgtcactagaggtgcgtctgcagtttgattcggaggacgtcatt
tccccgtcagaggcagagaacaacccgtgtttctcggaccccagctcccactccccccag
ccgcccggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagaat
cgtccagtgcggatgcccccggggtaccaggctgagttggtggtgcagctgcagtgggtg
gatggagaacccccccagcagatcaccagcctggacatcaactctgcctacggcctccta
gcgtttgggaactgtaatgggctcacggtggtggacttccttcagaagacgatcctgatg
tgtatgggcacactggacctgtacggagccgcagacccctaccaacgactcacacgctcc
ccacgcaagaacagacagtccacctcagacttttgcatgcgcggcctgtctcacttttat
tccgattcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataac
caggtatccatggacatggagagaagcaagtcacccacctcagttccctacccaagctcc
cttcactatgaccctcgctccatgcctgagcctgtggccagtctgagagccagccactgc
agtccagtcttttacttactggacaatgtaaagggacccggcagaaagttaagtctgcca
acagatcttaagactgatcttgatcatgtcaatggacattgcactagtcccacctcccag
ccctgctccgtgggcaagcctcgcatcacaggggttcccgagggcccgcggctcacccgg
agagggcctggccgaccgcccttccgcaaggcccagtccgccgcttgcatggagatctct
ttgcctgtttcctcccacacagaaggtggctatgcgtccaggagggcaatgcttcagcag
ttacatggagtcagtatgtactcccacgacgagcaccacaccacctcctacaactggagc
gagagagcagaaagtagagagaactcattcagtcgctcgcggagctccagtgtgtccagc
atcgatcgcgacaccaaggagtcagtgaccacgttgcagttcggagagtcctacggccgt
aagggcgatgctcttcctaccgcctgcctgtgggtgggcaccagcctgggcgtggtcctg
ctcttgcccatatccatccccacagaagaggaggagaggatggaggagcccatcaccatg
gggcccagtggtaccgtcctgatgctaaaaggctctgtgttgcgatttgccttcctggac
tgtgggggcgctctcattcagagtccctacgaggtgtggcgggaccccaacggtcccgaa
gaccccgaccggccccgcaggcgcaagctggtcaacttctccccgtcatcatcccaggag
gcgtgcagtgacggtcacctggccgttgtgtgctctgagaagcaggccaaggtcatcctc
atgcccacccaggctgtcctgttcacccacaacatcaccgagtcctccttcctcctgcgg
gctgacgttgtctccgtctgcaacagcgtctgcctcgcctgcttctgcgccaacggacac
atcatgaccctaagtttgcccagtctaagacccctgatggatatcaactaccttcccctg
accgacttgcgtatcgcccggacctttgtcttcactaacggaggccaggccctgtatctg
agctctcctacagagatacagcgcctcacatacagccaggagatgacggacaacctacag
gacatgctgggggagctgttcactcctatagaaacaccagaggcccagaacaaaggattc
ctcaagggcttcttcgggggcaatgcccagaccttcgacagagaggagctgtttggggag
gcagcagcgggtaaggcctctcggagtttggcccagcacatccctggtccaatgggattg
gagaacatgaagactgcagccggcggtgtcgtgggggacctggcccgagcccgcatcgcc
ctggaccagagaggagagaggctgggcgagctggaggaacgcaccgccctcatgatgaac
agcgccgagaccttctccacacacgcccaccaggtgatgctgaaacaaaaggacaagaaa
tggtatcagctttaa
DBGET
integrated database retrieval system
