Salvelinus fontinalis (brook trout): 129816260
Help
Entry
129816260 CDS
T11136
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129816260 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129816260 (gtf2e1)
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
129816260 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
129816260 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
129816260
NCBI-ProteinID:
XP_055726503
LinkDB
All DBs
Position
19:complement(6872777..6914340)
Genome browser
AA seq
454 aa
AA seq
DB search
MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADLYTQNVEISMGEQEEQQRKQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNSG
DDAGGAQVGVAGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAARALTSSSAARGS
DSESDTSESDEDAPTAPPPVAAAQRRPTGMEMEEEDEDDEFEEVGDDESMVMVGGRSFSY
REVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctctggacgttcttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaatacgctcaagggcgacaagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgactgctggtc
aatgtggtgaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaacagggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcagctgtttgaccccatgaccgggacgtttcgctgtacgttctgtcagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aacgaacagatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccctgccctcaaacagagtcgagaccgt
gcggcggcggcagcgggtgcagcagctggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacctgtacacccagaacgtggagatcagcatgggggagcaggag
gagcagcagcgcaagcaggccagcgaggggaaggcacctagggagagacccgtgtggctg
acagagagcactgtgcatggaggaacgtacagcgagccagacccactcaagaactccgga
gacgacgcgggaggagcccaggtgggtgtggccgggctcggcggcggccaatcggacgaa
aacgaggaagtgatgcgcgccctgctcatccacgagaagaggagcggtgccgggccggca
ggaggtggagccgtagcggcagccagggcactcacctcctcatcagcagccaggggcagc
gactcggagagcgacaccagcgaatcagacgaggacgctcccacggctccgccgcctgtg
gctgcggcccagcggcggccgactggcatggagatggaggaggaggatgaggatgacgag
tttgaggaggtgggggacgatgagtccatggtgatggtggggggacggtccttctcctat
cgggaggtgagccagagaccagagctagtggagaagatgagctctcaggagaaagaggcc
tacatcgagatgggacagaacatcttccaggagatgtacttctga
DBGET
integrated database retrieval system
