Salvelinus fontinalis (brook trout): 129816279
Help
Entry
129816279 CDS
T11136
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon04814
Motor proteins
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129816279
09142 Cell motility
04814 Motor proteins
129816279
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129816279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129816279
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129816279
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
129816279
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
129816279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
Nbas_N
Beta-prop_DCAF4
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
129816279
NCBI-ProteinID:
XP_055726534
LinkDB
All DBs
Position
19:complement(7514949..7567097)
Genome browser
AA seq
632 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADLKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTSKSVGTPSEAGSQDSGDGAVGSRTLHWDSDPSTLQLHS
DSELGRGPLKLGMAKITHVDFPPKETVSYTKETQTPVTTQQKEEEDEEEEEEEEIAPPQP
VLEIQTEKPDQKEEEEAPPQELTEEEKLQILHSEQFITFFDHSTRIVERALSQHVDVFFD
YSGREMEEKEGEIQAGAKLFLNRQFVDERWSKHRVVTCLDWSPQYPELLVASYNNNEEAP
HEPDGVALVWNMKYKKNTPEYVFHCQSAVMSAAFARFHPNLVVGGTYSGQIVLWDNRSNK
RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELVF
KQSKAVAVTSMSFPLGDVNNFAVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHT
ATGPVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGV
GHLDLWNLNNDTEVPTASTTVEGNPALNRVCWAHSGKEIAVGDSDGQILVYDVGEQIAVP
RNDEWTRFVRTLAEINENRDDAEELAAQRLSA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctgaaagcggagcttgaacggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacctgaag
aaagatgccgccccactggatgactcggatttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacatcagctgatgtccctgttgtccctcctcccatgtct
ccgacctccaaatctgtgggcacaccaagcgaagcagggagccaagactcgggcgacggc
gccgtgggatccaggactctacactgggactctgacccgtctactcttcagcttcactct
gactccgagctggggcgtggacctctgaagctgggcatggccaagatcacccatgttgat
ttccctccaaaagagacggtgtcgtacaccaaggagacccagacgcctgtgaccacccag
cagaaagaagaggaagacgaggaggaggaggaggaggaggaaattgctccaccacaacca
gtgcttgagatccaaacggagaaaccagaccagaaagaggaggaggaagcacctccacaa
gagctgactgaggaggagaagctgcagatcctccactctgagcagttcataaccttcttt
gaccacagcacccgcatcgtggagcgggccctgtcccaacacgtggacgtcttcttcgac
tacagtggtcgcgagatggaggagaaggaaggtgagatccaagctggggccaagctgttt
ctgaacagacagtttgtggatgagcgctggtctaagcatcgcgtggtcacctgtctggac
tggtcccctcagtatcctgagctgctggttgcctcatacaacaacaacgaggaagccccc
cacgagccggacggggtggccctggtctggaacatgaagtacaagaagaacactccggaa
tacgtcttccactgccagtctgcagtgatgtcggccgcctttgccagattccaccctaac
ctggtggtggggggcacctactcggggcagatcgttctgtgggacaacaggagcaacaag
aggacccccgtgcagaggacccctctgtcagcagcagcacacacgcacccagtgtactgt
gtgaatgtggtgggcacccagaacgcccacaacctcattagcatctctaccgatggcaag
atgtgttcctggagcctggacatgctgtctcaaccgcaggacagcctggagctggtgttc
aagcagtcgaaggccgtcgctgtcacctccatgtctttccccctcggagatgtcaacaat
tttgccgtggggagcgaggacgggtccgtctacatggcgtgtcgtcatggaagtaaagca
gggatcagtgagatgtttgagggccaccacgggcctatcacagggatagactgtcacaca
gcgaccgggcctgttgacttctcccatctgtttgtcacctcctcctttgactggaccgtc
aagctgtggagcaccaagaacaacaagccactgtactcgttcgaggacaactcggattac
gtctatgacgtcatgtggtcccccactcacccggctctgtttgcgtgtgtggatggagtg
ggccatcttgatctgtggaacctcaacaacgacactgaggttcctacagccagtaccaca
gtggaggggaacccagccctgaaccgcgtgtgctgggcccactctggcaaagagatagcc
gtgggagactctgatggacagatcctggtctatgatgttggagagcaaatcgctgttcca
cgcaacgacgagtggacccgctttgtccgaaccctggcggagatcaacgagaaccgggat
gatgccgaggagcttgccgctcagcgcctctctgcctga
DBGET
integrated database retrieval system
