Salvelinus fontinalis (brook trout): 129816384
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Entry
129816384 CDS
T11136
Name
(RefSeq) integrin beta-2-like isoform X1
KO
K06464
integrin beta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04517
IgSF CAM signaling
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129816384
04517 IgSF CAM signaling
129816384
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129816384
09142 Cell motility
04810 Regulation of actin cytoskeleton
129816384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129816384
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129816384
04515 Cell adhesion molecules [BR:
sfon04515
]
129816384
04090 CD molecules [BR:
sfon04090
]
129816384
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129816384
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129816384
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129816384
CD molecules [BR:
sfon04090
]
Proteins
129816384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
vWA_SIBA-E
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
129816384
NCBI-ProteinID:
XP_055726784
LinkDB
All DBs
Position
19:complement(12404948..12422393)
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AA seq
785 aa
AA seq
DB search
MTLEMYPCVSLLLLLMGRGAIPLVLSQEVKVCSKTVINSCNDCIKSGAYCTWCKQLNFIK
PGEQEAARCDTWAQLVERGCMEGDIISPDNTFSFSKNVALSNTALDKEEPIQLRPQEVNL
KLRPGLPHTFTLDFQRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFNALQGITKKGR
IGFGSFVDKTVLPFTNTNPEKLNKPCAEAEMYCQPAFGYRHVLSMTENKAEFESKVNQQR
ISGNLDSPEGTLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDE
RCYMDNNLYSKSNEMDYPSVGQVANQLEKNNIQPIFAVTKNMENVYRELSKMIPKSEVGV
LSADSHNVVELIKNAYNRLSSKVTVTHDALPDNVRVTYTPLCPEGGPSRDKGVCNNVRVG
QMVSFNVTVTADECMDSEMSFLIGPLGMKDKLKVSLSTLCKCKCDDRVLAEHPYCNRKGQ
VNCGMCSCQASFVGQKCECSIGAKDESSLRAACRKDNGTECEGRGDCVCGICQCHTLQGG
STYYGTHCECENESCEKFQNKLCGGNGKCRCKNCECNPGYEGTACQCKKSDEQCRTPSGS
VCSGRGTCQCNQCKCIEGYQRPYCLTCPACQTPCITKGKCIECLGFQTGPFSKNCSQACT
SINEFKMVETLPPGKPCDVRDVESCRVFFTVKQLDGEDTYTAQILKTRECPKLPNIYAII
GGSIAGVTVIGILILILIKVLFHMKDLKEYRKFMNDAQKTKWSENKNPIFQEATTTVANP
TFSGE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgaaatgtatccgtgtgtgtctctcctgctcctgctgatgggcagaggtgcc
attcccctagtgctctcccaggaggtgaaagtatgttccaaaacagtgatcaactcctgc
aatgactgcatcaaatcaggagcgtactgcacatggtgcaaacaactgaatttcatcaaa
ccaggggagcaggaagcagctcgctgtgacacctgggctcagctagtagaaaggggctgc
atggaaggagacatcatatctcccgacaataccttttctttttctaagaacgtcgccctg
tccaacactgcattggacaaggaggaacccatccagctccgtcctcaggaggtcaatctg
aagctcagaccaggactgcctcatacgttcacgctggactttcagagagtggagggctat
cctgttgatctctactacctgatggatctctcctactccatggaggatgatttgaggagc
atcaagactctgggaaatgaactgtttaatgctctgcaaggcatcacaaaaaaaggacga
atcggttttggctcttttgtagacaagactgtcctgccgttcactaacaccaacccggag
aagctgaataagccatgtgccgaagcagagatgtactgccaacctgcttttggctacaga
catgttcttagcatgacggaaaacaaagctgagtttgagagcaaagtcaaccagcagcgc
atctctgggaacttagactcccccgaagggacactggacgccatcatgcaggctgcagtc
tgtggggacaggattggctggaggaatagcagcactcggcttatcgtcctgaccaccgac
gatggcttccacatggcaggggatggcaagctggctggcatactggagcccaatgacgag
agatgttacatggacaataacctgtacagcaagagcaatgaaatggactacccatctgtt
ggtcaagtggctaatcagttagagaagaacaacattcagccaatctttgctgtgacgaag
aacatggagaatgtatacagggaactcagtaaaatgatccccaagtctgaggtgggagtg
ttgtcagctgactcccataatgtcgttgaactgatcaaaaatgcctacaataggctctcc
tccaaagtgacggtgactcatgatgctctccctgacaacgtgagagtcacttacactccg
ctctgtcctgaagggggaccctcaagggacaaaggagtgtgtaacaatgtgagagtggga
cagatggtgtctttcaatgtaacagtgacagcggatgaatgtatggacagtgaaatgtct
ttcctgattggtccgttgggtatgaaggacaagctgaaagtgagcttgtcgactctctgc
aagtgtaagtgtgatgaccgtgtgctggccgaacacccgtactgcaataggaagggccaa
gtcaactgtggcatgtgcagttgccaagccagcttcgtgggccagaagtgtgagtgctcc
atcggggcgaaggacgagagctctctgagagcggcgtgccggaaggacaacggcacggag
tgtgaaggacgaggggactgtgtgtgtggcatttgccagtgccacaccttacaaggcggc
agcacctactacggcacgcactgcgagtgtgaaaacgagagctgcgagaagtttcagaac
aaactgtgtggagggaacggaaaatgccgttgcaaaaattgcgaatgcaaccccgggtac
gagggcaccgcctgccaatgcaagaagtcggacgagcagtgtcgcacaccaagcgggagt
gtgtgcagcggcaggggcacatgccagtgtaaccagtgcaagtgtattgagggctaccag
cggccctactgtctgacctgtcccgcctgccaaaccccctgtataaccaaggggaaatgc
attgagtgtctgggctttcagacaggcccattcagtaagaactgctcccaggcctgtacg
agtattaatgaattcaagatggtggagacgttgccacctggtaagccttgtgatgttagg
gatgtggagagctgccgggtgttctttaccgttaaacagttggacggagaggacacctac
accgcccaaatactaaagaccagagagtgtcccaagttgccaaacatctatgccatcatt
ggaggctccatcgcaggcgtgactgtcatcggaatcctgatcctgatcctcatcaaagtc
ctcttccacatgaaagacctgaaggagtaccgcaagtttatgaatgatgcgcagaagacc
aagtggtcggagaataagaatccaatattccaggaggcaaccaccaccgtggctaaccct
acctttagtggagaataa
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