Salvelinus fontinalis (brook trout): 129816506
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Entry
129816506 CDS
T11136
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129816506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sfon04050
]
129816506
Cytokine receptors [BR:
sfon04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
129816506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
SCIMP
Motif
Other DBs
NCBI-GeneID:
129816506
NCBI-ProteinID:
XP_055727040
LinkDB
All DBs
Position
19:complement(23092086..23155007)
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AA seq
517 aa
AA seq
DB search
MERETFCLSGGKERDQGEATMKDRSREGVKMFQKGSQKESLFLCLLLVSCPPSLRSEYSS
CGEFEFYNQTLSSCQPCPPCQPGREPHMNCGYGTKDEDFVCVSCPPGKYSKGKYEICRRH
KDCEGLYRATVLKPGTPDNDADCGPCLPGYYIQENRPRNLYGMVCHSCQNAPRNTKECML
TKAVLSGKAPSVSTSSTTMFPHPHKDPTGQGHLATALIIAMSTIFIMAIAIVLIIMFYIL
KAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVVIFSEKDEFDKLKPTPPKTVKSEND
ASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLLNLGTKPDICLLSLGLLNRDKTVSN
PTGPINANNISNGNANIVNNNNYNKATGIQSRRKKILDLYARACNVAEGLSPTELPFDCL
EKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERISTAGYSIPDLLT
RLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCASV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagacgttctgcctcagtggaggtaaagagagggatcagggagaggcgacg
atgaaagacagatcacgggaaggtgtgaagatgttccagaaaggaagtcagaaagagtct
ctcttcctctgtttgttattggtatcctgtcctccctctctcaggtcagagtacagtagt
tgtggagagtttgagttctacaaccagaccctcagtagctgccagccctgcccaccatgc
caacctggacgggagccccacatgaactgtggctatgggactaaggatgaggactttgtg
tgtgtgtcgtgtccgccggggaagtactcgaagggaaagtatgagatctgcaggagacat
aaggactgtgaaggtctgtaccgtgctacagtactcaaacctgggacaccagacaatgat
gcagactgtggaccctgcttacctgggtattacatccaggagaaccggcccaggaacctg
tatggaatggtctgtcactcgtgtcaaaatgcaccgcgcaacactaaagagtgcatgctt
accaaagctgtgttgtcaggcaaagcccccagtgtctcaaccagcagtaccaccatgttc
cctcaccctcacaaagaccccacaggacagggtcacctagcaaccgctctcatcatcgcc
atgtcaaccatcttcatcatggccatcgccattgtcctcatcatcatgttctacatcctc
aaagccaagcccagcggacaggcatgctgctctggtcaggtggtgaaggctgtggaggct
cagaccaacaaacaggaggacaagaaagatgttccagacaatgttgtaattttctctgaa
aaggatgaatttgacaaactcaaacctacgcctccgaagacggtgaaaagtgagaatgat
gcatcgtctgagaacgagcagctgttgagtcgtagtatggatagtgatgaggaggcagcc
ttggagaggcagggggcagctgatcctaaccccagcctctgtctcctgaacctgggaacc
aagccggacatctgcctgctttccctggggctcctcaacagggataagactgtatccaac
cccaccggccctatcaacgctaacaacattagcaatggcaatgctaacatcgtcaataac
aacaactacaacaaggctacagggattcagagccggaggaaaaagatcctggatctgtat
gctagagcctgcaatgtggccgagggtctgagtcctacagaactaccatttgactgtctg
gagaaggccagtcgtatgctgagctcctcctacagtagcgaggcagctgtggtgaagacc
tggagacacctggcagaaagctttggcctgaagagggatgagatcggagggatgagtgac
ggcctgcagctgtttgagaggatcagtaccgccggatacagcatcccagacctgctcacc
agactggtgcagatagagagactggatgctgtggagtcactatgttctgatgtactggga
ggaggagatacacacactgtccctctgtcctcaccacgctgtgcaagcgtctga
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