Salvelinus fontinalis (brook trout): 129816517
Help
Entry
129816517 CDS
T11136
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129816517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
129816517
NCBI-ProteinID:
XP_055727058
LinkDB
All DBs
Position
19:complement(23630106..23637447)
Genome browser
AA seq
620 aa
AA seq
DB search
MDSPMCLVENADGELHVVPGAIKYLMGLNQKVVVVSVVGLYRTGKSYLMNKLAGKRKGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHVDEEGGDAQFVQFFPNFVWAIR
DFTLLLEIDGRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEAGLCGSFRKVADTFCRFIFQESRTKTVKGGHNVTGRMLGHLVNTYVET
IAKGSVPCLENAVLAMAQIENQAAVDEGQVVYQRGMEEVKALFPVDMGQISAHHLRSDHQ
ATQAFMKRSFKDENGDFLKALAVAIAKHYADLLIQNEDASEKKCAALLEKLSAPMAQKIK
EGIYTTPGGYELYCNHHDNMVAQYRAEPDKGVGAEEILEQFLREKSLEKNSILQADKKLT
ENEKIIYEEKERSAVLEQEKKAAEEKRLEMERTMEDDRRSKDEKLKQMEEKMKEEMKLQE
RDFHRALECKVQEQKDLLEKGHKEKAELMRQEIEEFKKSNTPEKEGGGFLESTVIPVLRF
GLDAANTFFQYKLMRGAFMK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgtctggtcgaaaacgccgatggcgagcttcatgtagtccctggt
gccatcaagtacctgatgggactgaaccagaaagtcgtagtggtgtcggtggtcgggctg
taccgcaccggcaagtcttacctcatgaacaagctggctggaaagagaaaaggttttgcc
ctgggagccaccatccaatccaagactaagggcatctggatgtggtgtgtgcctcaccct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggatgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaacctccaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgttgac
gaggaaggaggggatgcccagtttgtgcagttctttccgaattttgtgtgggccatcaga
gatttcactctactactcgagatcgacggcagaaacgtcactgaagatgagtatctggag
cattccctggagctcagaaaaggtgggggtaaaaagaatctgatgtacaacctcccacga
gagtgcatcaggaactacttcccctcgcgcaagtgctttgtattccccacccctacaact
cctgccaacatgccccatctggattccatggacgaggctggcctgtgtggaagcttccga
aaggttgcagatactttctgccgcttcattttccaggagagccgtacaaaaactgtcaaa
gggggccacaacgtaaccgggagaatgctcggccacttggttaacacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcggtgctggccatggctcaaattgag
aaccaggctgctgtggatgagggccaggtagtataccagaggggcatggaggaggtgaag
gccttattccctgtggacatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagatgaaaatggggatttcttgaaagcg
ttggcggtggccattgcaaagcactacgctgaccttctcattcagaacgaggatgcctca
gagaagaagtgtgcagcccttctggagaagctgtctgctccgatggcccagaagattaag
gaggggatctacaccacacctggaggatatgagctttactgcaatcaccatgacaacatg
gttgcacagtaccgagccgagcctgataaaggagttggggctgaggagattcttgagcag
ttcctgagggagaagagtctagagaagaattccatcttgcaggctgacaaaaaattgacg
gaaaatgagaaaataatctatgaggagaaggagagatcagctgtgctggagcaggagaag
aaggctgctgaagagaaacggttggagatggagcgcaccatggaggacgatcgcagaagc
aaagacgagaagttgaagcagatggaagagaagatgaaggaggagatgaagctacaggaa
cgggacttccacagggccttggagtgcaaggtgcaggagcagaaggatctgctggagaag
ggccacaaggagaaggctgaattaatgagacaggagatagaggagttcaagaagagcaac
acacctgagaaggaaggaggtggtttccttgagtctacagtcatacctgttcttcgattt
ggattggacgctgccaacactttctttcaatataagctcatgaggggagcttttatgaag
tag
DBGET
integrated database retrieval system
