Salvelinus fontinalis (brook trout): 129816518
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Entry
129816518 CDS
T11136
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129816518
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
129816518
NCBI-ProteinID:
XP_055727061
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Position
19:complement(23666003..23684780)
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AA seq
689 aa
AA seq
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MDSPMCLVENADGELRVVPGAIKYLMGLNQKVVVVSVVGLYRTGKSYLMNKLAGKRKGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHDDEEGGDAQFVQFFPNFVWAIR
DFTLLLEIDGRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEAGLCGSFRKVADTFCRFIFQESRTKTVKGGHNVTGRMLGHLVNTYVET
IAKGSVPCLENAVLAMAQIENQAAVDEGQVVYQRGMEEVKALFPVDMGQISAHHLRSDHQ
ATQAFMKRSFKDQNGDFLKALAGAIAKHYAVLLIQNEDASEKKCAALLEKLSAPMAQKIK
EGIYTTPGGYELYCSHHDNMVAQYRAKPDKGVRAEEILEQFLREKSLEKNSILQADKKLT
ENEKKIHEEQEKRALAEQAVKMEAEKQHQLEKLIQERERSHQEGICQLEAKMVQEAKEKQ
QELERALDSKLHEQEKLMAKGFTEKEAAMKEEIQSLREEEAKCKEKEEQSRNFRAIAQGV
MESVSNGLGHYFNYKKACEQCKAIVFKEQVRFNLKSGAVGNIPDKERMTLEQDKMATPKL
KTGAVGNSKDTTLPKVNTGTTGKSPGSEV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgtctggtcgaaaacgccgacggggagcttcgtgtagtccctggt
gccatcaagtacctgatgggactgaaccagaaagtcgtagtggtgtcggtggtcgggctg
taccgcaccggcaagtcctacctcatgaacaagctggctggaaagagaaaaggttttgcc
ctgggagccaccatccaatccaagactaaaggaatctggatgtggtgtgtgcctcaccct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggacgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaacctccaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgatgac
gaggaaggaggggacgcccagtttgtgcagttctttccgaattttgtgtgggccatcaga
gatttcactctactactcgagatcgacggcagaaacgtcaccgaagatgagtatctggag
cattccctggagctcagaaaaggtgggggtaaaaagaatctgatgtacaacctcccacga
gagtgcatcaggaactacttcccctcgcgcaagtgctttgtattccccacccctacaact
cctgccaacatgccccacctggattccatggacgaggctggcctgtgtggaagcttccga
aaggttgcagatactttctgccgcttcattttccaagagagccgtacaaaaactgtcaaa
gggggccacaacgtaaccgggagaatgctcggccacttggttaacacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcggtgctggccatggctcaaattgag
aaccaggctgctgtggatgagggccaggtagtataccagaggggcatggaggaggtgaag
gccttattccctgtggacatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagaccaaaatggggatttcttgaaagcg
ttggcgggggccattgcaaagcactacgctgtccttctcattcagaacgaggatgcctca
gagaagaagtgtgcagcccttctggagaagctgtctgctccgatggcccagaagattaag
gaggggatctacaccacacctggaggatatgagctttactgcagtcaccatgacaacatg
gtggcacagtaccgggccaagcctgataaaggagttagggctgaggagattcttgagcag
ttcctgagggagaagagtctagagaagaattccatcctacaagctgacaaaaaattgacc
gaaaatgagaaaaagatccacgaggagcaagagaagagagccctggctgaacaggcagtg
aagatggaggcagagaaacagcaccagttagagaaactgatccaggagagggagaggagt
catcaggagggaatctgtcagctagaggctaagatggtccaggaggcgaaggagaagcaa
caggagttggagagagcgctagatagcaagctccatgagcaggaaaagctgatggctaag
ggcttcacagagaaagaggcagccatgaaggaggagatacagagcctgagagaggaggag
gccaagtgcaaggagaaggaagagcagtctcgtaacttcagagccatagcacagggtgtc
atggagagtgtcagcaatggcttaggtcactactttaactataagaaagcctgtgagcaa
tgcaaggcgattgtgttcaaggagcaggtcagattcaatctcaaatcaggtgcggttggc
aatatccctgataaggagcgcatgacactcgagcaagacaagatggccacgcccaaactc
aaaacaggagcagttggcaactctaaagacacaactctgcccaaagtcaacacaggtaca
actggcaaaagccctggctcagaggtctaa
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