Salvelinus fontinalis (brook trout): 129816620
Help
Entry
129816620 CDS
T11136
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129816620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129816620
03110 Chaperones and folding catalysts [BR:
sfon03110
]
129816620
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129816620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129816620
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
129816620
Messenger RNA biogenesis [BR:
sfon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
129816620
Chaperones and folding catalysts [BR:
sfon03110
]
Heat shock proteins
HSP60 / Chaperonin
129816620
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
129816620
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129816620
Exosomal proteins of other body fluids (saliva and urine)
129816620
Exosomal proteins of breast cancer cells
129816620
Exosomal proteins of colorectal cancer cells
129816620
Exosomal proteins of bladder cancer cells
129816620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
129816620
NCBI-ProteinID:
XP_055727306
LinkDB
All DBs
Position
19:complement(31980710..31989012)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVCRALAPHLTRTYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISTVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDIAVATGGTVFGDEAVGIALEDIQAHDFGQVGEVSVTKDDTMLLKG
KGDTASIEKRQAQIAEQLENTTSDYEKEKLNERLAKLSDGVAVVKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINADQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAVEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKEEKEGGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctacccacggtgatgagacagatgaggccggtctgcagggccctggccccc
cacctcacccggacttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggtcccaagggtcgc
acagtaatcatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacatcggtgccaagctggtccaggac
gtggccaacaacacaaacgaggaagcaggagatggcaccactaccgccactgtgctggcc
agagccattgccaaggagggctttgacaccattagtaaaggcgctaaccctgtggagatc
cgccgtggcgtgatgctggctgtggagactgtcattgctgaactgaagaggatgtctaag
ccagtcaccacacctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaaaaaagtgggccgcaagggagtcatcact
gtcaaggatggcaagaccctgcatgatgaacttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaagatctctactgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggctgaggatgtggacgga
gaggccctcagcaccctggttctcaacaggctgaaggtgggactacaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcacgacatagccgtcgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgccctggaggacatccaggcccat
gactttggccaggtgggtgaggtgtcagtgaccaaggacgacaccatgctgctgaagggg
aagggagacacggcatccatcgagaagaggcaggctcagatcgctgagcagctggagaac
accaccagcgactacgagaaggagaagctcaacgaaaggctggccaagctatctgacgga
gtggctgtggtcaaggtgggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgactgacgccctgaatgccaccagggccgctgtggaggagggcattgtgcccgggggt
ggctgtgccctgctgcgctcaatccctgccctggatgctctcgtgcccatcaacgctgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccggccatgaccattgct
aagaacgctggtgtggagggctctctagtggtagagaagatccttcaggccgcggtggag
atcggctacgatgccatggaaggagagtacgtcaacatggtagagaagggcatcattgac
cccaccaaggtggtgaggactgcactaatggatgctgcaggtgttgcatcccttctctcc
actgctgagtgtgtggtcacagagctgcccaaggaggagaaggagggtggcatgccagga
ggtatgggaggtatgggcggtatgggaggtatgggcggtggcatgttctaa
DBGET
integrated database retrieval system
