Salvelinus fontinalis (brook trout): 129816632
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Entry
129816632 CDS
T11136
Name
(RefSeq) ras-related protein Rab-5B-like
KO
K07888
Ras-related protein Rab-5B
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04137
Mitophagy - animal
sfon04144
Endocytosis
sfon04145
Phagosome
sfon04148
Efferocytosis
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129816632
04145 Phagosome
129816632
04137 Mitophagy - animal
129816632
04148 Efferocytosis
129816632
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129816632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129816632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129816632
04031 GTP-binding proteins [BR:
sfon04031
]
129816632
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
129816632
Endosome - Lysosome transport
129816632
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129816632
Exosomal proteins of other body fluids (saliva and urine)
129816632
Exosomal proteins of colorectal cancer cells
129816632
Exosomal proteins of melanoma cells
129816632
GTP-binding proteins [BR:
sfon04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
129816632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
129816632
NCBI-ProteinID:
XP_055727332
LinkDB
All DBs
Position
19:32478233..32486401
Genome browser
AA seq
219 aa
AA seq
DB search
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGSGGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagggagtggccggcccaattgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagtttcaggagaccaccattggagctgcattcttggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggcagctattgtggtcttt
gatatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggcaagccccaacattgtcatcgctctggcagggaacaaggctgacctggctgagaag
agactagtggagtacgaggaggcccagacctattctgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgaactgttcctggccattgccaaaaag
atgccaaaaacggacacccagaaccctacacacgcagcacgacaccggggagtgaaccta
caggaccccgatgcccacaacacccgatcctgctgtggaggaagcggcggagggaactag
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