KEGG   Salvelinus fontinalis (brook trout): 129816632
Entry
129816632         CDS       T11136                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04137  Mitophagy - animal
sfon04144  Endocytosis
sfon04145  Phagosome
sfon04148  Efferocytosis
sfon05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129816632
   04145 Phagosome
    129816632
   04137 Mitophagy - animal
    129816632
   04148 Efferocytosis
    129816632
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129816632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfon04131]
    129816632
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfon04147]
    129816632
   04031 GTP-binding proteins [BR:sfon04031]
    129816632
Membrane trafficking [BR:sfon04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    129816632
 Endosome - Lysosome transport
    129816632
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129816632
  Exosomal proteins of other body fluids (saliva and urine)
   129816632
  Exosomal proteins of colorectal cancer cells
   129816632
  Exosomal proteins of melanoma cells
   129816632
GTP-binding proteins [BR:sfon04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    129816632
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 129816632
NCBI-ProteinID: XP_055727332
LinkDB
Position
19:32478233..32486401
AA seq 219 aa
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGSGGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggctaccagagggagtggccggcccaattgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagtttcaggagaccaccattggagctgcattcttggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggcagctattgtggtcttt
gatatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggcaagccccaacattgtcatcgctctggcagggaacaaggctgacctggctgagaag
agactagtggagtacgaggaggcccagacctattctgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgaactgttcctggccattgccaaaaag
atgccaaaaacggacacccagaaccctacacacgcagcacgacaccggggagtgaaccta
caggaccccgatgcccacaacacccgatcctgctgtggaggaagcggcggagggaactag

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