Salvelinus fontinalis (brook trout): 129816662
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Entry
129816662 CDS
T11136
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129816662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129816662
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
129816662
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
129816662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129816662
NCBI-ProteinID:
XP_055727390
LinkDB
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Position
19:complement(34787704..34835974)
Genome browser
AA seq
1345 aa
AA seq
DB search
MNRTKKYEGLCSEGKPPAEVPIGWQRRITHSGVVYISPSGSVLACLEQVKSYLLTDGTCK
CGLECPLTIHKIFSFDPGAAVKHRMAEDARADADVTKLCIHKRKIIATATLHRNMESLYP
SLALASHGSGTGSATVGPMSHPAIKNSMYDGPPNKMTIPGQRYYNHELGSPQRDPYSGYS
RTRLGGSDHCSQQRSPYRIRHSVLLSPSSSTSCGSQHYGDGTPSPRTELLGSPEPNMLGF
HGACSPGSALMNGDRFTPLSPPSVLLHGSPSATQPSCAIAGRTNVPINAKSPNMQKPFYS
FPHNNFQHKLQPACHPHPQSHLSLSQLPPSSEMDPLGILDPIPSKTPSQGPLVSNVSGLQ
HSAHSQVPPMNVNIPPTSVPLPSNLPLPTGKSGHVGHGQRVQHHPTPSSVSSSPIVSPVH
MAGPVLARVEESPHRSRCSSGSSEHGSFAHPTGLQVPCGGSKPLPRSPRASLVSPRPAMP
PSSYKMDKLHHLNDNPNYLPGNSSLSRHSNSMCPPAPGSDSVLQRNHSVGMPLNKMLDQQ
NPASFPASSLLSAAAKAQLVNQNKHPDSAAAAEAHSGSGLGHPGLVGGGRGGNLDGHSTL
NQRYLPNPGPLASEVQTGRAALRDKLMGMAQQREANRKRKLSNDVSGGGVNNDRAFDVLK
HPMGGSGSSSASFPEPLRRMFQQGSLSSNTSMAQLLQSMSHQSAHNGPSHVGHSPARSSK
SPFLEEALPHMSALQQSLRGPQLQGRALVPFFQNMNNEGQISGQGLNMEQFNGPMNVMQD
PALAGNVGVLGYGGRQHAAMGSMQDNPNSHQQQQFGRYQKPSQVQGNPHFRGRAGLPPMM
SNGSVQALSKSVEVSSSLTCELRQAQEESLQSLIRSSQANTQQQLVQGPGRHSIQSQQLH
RFQSQGSHPVAPLPGGAASNPMNSLLQRFQGGLPERIPLPNRAMMSRPGIMSMSQPGAPC
LQEVHREYQSPQGLRSGGGEVIDPIHREAMGMASKSTSNVITSAGGSSTFAATVVCEPVD
LSHAVNSVIHTGPLRSFQEPVPEHRHHPKVGRPRKKTPERNNIFSPVAMESPTRFRSPRR
GAQRRQWDGEAEGKEQAGLWRDDEPLQQLTLAQSRNGTYPERPKGQAHLGPQDQTPLQVP
SGMYAHMNGNGRGHTSGRPRHPSLSPPEGHFTKDCGLFNGHLNGQLDGQLNGHCYNRYYN
GHLNGSLSGEEDLRPGDSPSSSEGLQLHHRPRTQTHYPGELLWGQGNGFPPWSGKMGSEG
HMYSLGMVNSIQGKVESDNFQRTLTEDLETLHKANKITRNGGKRNNNLEAAIQEAMSELD
KMTGNMSQRDRQVKTPKPKRRKISR
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaacaaagaagtatgaaggtctgtgttctgaggggaagcccccggctgaagtc
cctataggttggcagcggaggatcacccacagcggggttgtctacataagtcccagtggc
tctgtgcttgcctgtctggagcaggtgaagagctacctgctgactgatggcacctgcaag
tgtggcctggagtgtcctctcaccattcacaagatattcagctttgaccccggggcggct
gtcaagcataggatggctgaggatgcacgagccgatgccgatgtcaccaagctgtgtatc
cacaagaggaagataattgctacggcaactctgcacaggaatatggagtcactgtacccc
tcgctggctctggctagtcacggtagtggcactggttcggcgacggtgggtcctatgagt
catccagcaataaagaacagtatgtacgatggtccacccaacaagatgacaatacctggt
caacggtactataaccatgaactgggttctcctcagagagatccgtactctggttacagc
aggacaagactggggggaagtgatcactgtagccaacaacggtcaccctaccgtatccgc
cacagtgtcctgctcagcccctcctcctccacctcatgtggctcgcagcattatggtgat
ggcactccctccccaaggactgaacttctggggagtcctgagcccaacatgcttggtttt
catggagcttgcagcccaggctctgcccttatgaacggtgatcgttttacacctctctca
ccacctagtgttctgctccacggctcgccttcggccacccagccctcgtgtgccatagca
ggaaggactaatgtacccatcaatgccaaaagccccaatatgcagaagcccttctacagc
ttcccccacaataactttcaacataagctccagcctgcatgccatccacacccacagtcg
catttgtccctgtctcagctccctccctcctctgagatggaccctcttggaatcctggac
cccattccaagcaagactccaagccagggtcccttagtgtcaaatgtatctggcctccaa
cacagtgcccattctcaggtaccaccaatgaatgtaaacatcccccctaccagtgtccct
ttgcccagcaacctgcctttaccaactggaaagtctggacatgttgggcatggccagagg
gtccagcaccaccctaccccttcatctgtctcgtcctcgcctattgtgtccccggtacat
atggctgggcctgtccttgccagggtggaggagtcaccccaccgttcacgttgctcctcc
ggatcttctgaacatgggagcttcgctcaccccacggggctccaggttccttgtgggggt
tcaaagccacttcctcggtcccctcgggcctccttggtgtcccctcgacctgcaatgccg
ccaagttcatataagatggacaaactccatcacttgaacgataaccccaactacctgcca
gggaacagtagtctaagcaggcattccaactccatgtgccctccagctcctggttctgat
agtgtccttcaaaggaatcactcggtaggaatgcccctaaacaagatgctagatcagcag
aatcccgcttccttcccagccagcagtcttctgtcagccgcagccaaagcacagctagtg
aatcaaaacaaacatcccgacagcgcagcggctgcagaggctcacagtggcagcggtttg
ggacacccagggctggttggtggaggcagaggtgggaacctagatggacacagcacttta
aaccagcgatatctacctaatcctgggccgttggcgagcgaggttcaaaccggaagagca
gcattaagagacaaactcatgggtatggctcagcagagagaggcgaatcgcaagcggaaa
ctgtccaatgatgtcagcggtggtggcgtcaacaatgacagggctttcgacgtgctcaag
catccaatgggtggctcaggatcaagttcggctagctttccagagcctttgaggagaatg
tttcagcagggtagcctgtcctcaaacacctccatggcccagctactccagtccatgagc
caccagagtgcccataatgggccaagccacgtgggccacagcccagcccgatccagcaaa
tctcccttcttggaggaagctttgcctcatatgtcagctttgcagcagagcttgcggggg
cctcagctccagggcagagcgttggtccctttcttccagaacatgaacaacgaaggtcag
atttcaggccaaggtctaaacatggagcaatttaacgggccaatgaacgtaatgcaggat
cccgccttagctgggaacgttggtgtactgggttacggtggtagacaacatgcagccatg
gggtcaatgcaggacaacccaaactctcaccagcagcagcagtttggacgttatcagaaa
ccatcccaggtgcaaggcaacccccacttcagaggcagggcaggattgcctcccatgatg
tccaatggcagtgtccaagccctctctaagtcagttgaggtcagtagttctctgacctgt
gagctgaggcaggcccaagaggagagtctccagtctctcatcaggagcagccaagccaat
acacagcaacagcttgttcagggtccgggtcgtcactccatacagagccagcagctccac
aggttccagagccagggctcccatcctgttgcccctctccctggtggtgctgcctccaac
cccatgaacagcctccttcagagattccaggggggtttgcctgagaggattccactgccc
aacagagctatgatgagtcgaccggggattatgtccatgtcccaacccggtgccccttgc
ctccaggaggttcatcgagaataccagtctccccagggccttcgcagtggtgggggagaa
gttattgatcctatccacagggaagcgatgggcatggccagcaagagcacgtctaatgtc
attacatcagcgggtggtagcagtaccttcgctgctactgttgtctgcgagcctgttgac
ctctcccacgcggtcaactctgtcatccacaccggccccctccgctcatttcaggagcca
gtgccggagcaccgacaccatcccaaggtgggccggccccgcaagaagacccctgaacgg
aacaacatcttctctcccgttgccatggaatctcctacaagattccgctcgcctcgacgt
ggagcccagagaagacaatgggacggagaggcggagggcaaggagcaggctggtctgtgg
cgtgatgacgagcccctccaacagcttaccttagcccagagcagaaacggcacctaccca
gaaaggcccaaaggtcaggcccacttaggcccccaggatcaaacaccactgcaagtcccc
agtggtatgtatgcccatatgaacggcaacggtaggggccacacctcgggaagacccaga
caccccagcctgtccccaccagagggccacttcaccaaggactgcggcctcttcaacgga
catctgaacggccaactcgacggccaactcaacgggcactgctacaacaggtattacaat
gggcacctgaacgggagcctgagcggcgaggaggacctgaggcctggggactcaccctcc
tccagtgaggggctccagctccaccacaggccaagaactcagacccactacccgggagag
ctgctctggggccagggcaacggcttccctccatggtcaggcaagatggggagcgagggg
cacatgtactcccttgggatggtgaacagcatacagggcaaagtagagtcagacaatttc
cagaggacactaacagaggatctggagacactacacaaagcaaacaaaataactagaaat
gggggaaaacggaataacaacctagaagctgctatacaggaggctatgagcgagctggat
aagatgacgggcaatatgtcacagagagaccgacaagtcaagacccctaaacccaagagg
aggaagatctccagatga
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